Evidence map›Paper›PMID 32204727›Full record

ArticleBMC research notes2020

Development, characterization, and cross-amplification of polymorphic microsatellite markers for North American Trachymyrmex and Mycetomoellerius ants.

Alix E Matthews, Chase Rowan, Colby Stone, Katrin Kellner, Jon N Seal

Abstract read
In one paragraph

Article in BMC research notes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alix E MatthewsDepartment of Biology, The University of Texas at Tyler, Tyler, TX, USA.
Chase RowanDepartment of Biology, The University of Texas at Tyler, Tyler, TX, USA.
Colby StoneDepartment of Biology, The University of Texas at Tyler, Tyler, TX, USA.
Katrin KellnerDepartment of Biology, The University of Texas at Tyler, Tyler, TX, USA.
Jon N SealDepartment of Biology, The University of Texas at Tyler, Tyler, TX, USA. trachymyrmex@gmail.com.ORCID http://orcid.org/0000-0001-8013-1438

Funding

National Science Foundation DEB-1354629National Science Foundation IOS-152822
6 · The paper itself

Abstract

objectiveThe objective of this study is to develop and identify polymorphic microsatellite markers for fungus-gardening (attine) ants in the genus Trachymyrmex sensu lato. These ants are important ecosystem engineers and have been a model group for understanding complex symbiotic systems, but very little is understood about the intraspecific genetic patterns across most North American attine species. These microsatellite markers will help to better study intraspecific population genetic structure, gene flow, mating habits, and phylogeographic patterns in these species and potentially other congeners.

resultsUsing next-generation sequencing techniques, we identified 17 and 12 polymorphic microsatellite markers from T. septentrionalis and Mycetomoellerius (formerly Trachymyrmex) turrifex, respectively, and assessed the genetic diversity of each marker. We also analyzed the cross-amplification success of the T. septentrionalis markers in two other closely related Trachymyrmex species, and identified 10 and 12 polymorphic markers for T. arizonensis and T. pomonae, respectively.

Indexed as

Polymorphism, GeneticAnimalsAntsHigh-Throughput Nucleotide SequencingMicrosatellite RepeatsAttiniFungus-gardening antIntraspecific genetic diversityMicrosatellitesPopulation genetics

Identifiers

PMID32204727
PMCPMC7092486

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.