Evidence map›Paper›PMID 32198888›Full record

ArticleNucleic acids research2020

Regulation of the RNA and DNA nuclease activities required for Pyrococcus furiosus Type III-B CRISPR-Cas immunity.

Kawanda Foster, Sabine Grüschow, Scott Bailey, Malcolm F White, Michael P Terns

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 44 citations in OpenAlex.

  1. SAM-AMP lyases in type III CRISPR defence.Nucleic acids research · 2025
    Article
  2. Article
  3. Characterization of Five CRISPR Systems inInternational journal of molecular sciences · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Type III CRISPR-Cas: beyond the Cas10 effector complex.Trends in biochemical sciences · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
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  18. Article
  19. Article
  20. Digging into the lesser-known aspects of CRISPR biology.International microbiology : the official journal of the Spanish Society for Microbiology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Kawanda FosterDepartment of Microbiology, University of Georgia, Athens, GA 30602, USA.
Sabine GrüschowBiomedical Sciences Research Complex, School of Biology, University of St Andrews, St Andrews KY16 9ST, UK.
Scott BaileyDepartment of Biochemistry and Molecular Biology, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD 21205, USA.
Malcolm F WhiteBiomedical Sciences Research Complex, School of Biology, University of St Andrews, St Andrews KY16 9ST, UK.
Michael P TernsDepartment of Microbiology, University of Georgia, Athens, GA 30602, USA.
University of Georgia · USUniversity of St Andrews · GBJohns Hopkins University · US

Funding

CRISPR Capture, Destroy, and Counter-Attack MechanismsR35GM118160 · NIGMS · UNIVERSITY OF GEORGIA · PI TERNS, MICHAEL P · 2016 to 2025
$5.8M
Mechanistic Studies of the Type I CRISPR-Cas SystemR01GM097330 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BAILEY, SCOTT · 2011 to 2024
$4.2M
Molecular Mechanisms of Invader Silencing in Type III CRISPR-Cas SystemsF31GM125365 · NIGMS · UNIVERSITY OF GEORGIA · PI FOSTER, KAWANDA A · 2017 to 2018
$76k
Biotechnology and Biological Sciences Research Council BB/S000313/1NIGMS NIH HHS F31 GM125365NIGMS NIH HHS R01 GM097330NIGMS NIH HHS R35 GM118160
6 · The paper itself

Abstract

Type III CRISPR-Cas prokaryotic immune systems provide anti-viral and anti-plasmid immunity via a dual mechanism of RNA and DNA destruction. Upon target RNA interaction, Type III crRNP effector complexes become activated to cleave both target RNA (via Cas7) and target DNA (via Cas10). Moreover, trans-acting endoribonucleases, Csx1 or Csm6, can promote the Type III immune response by destroying both invader and host RNAs. Here, we characterize how the RNase and DNase activities associated with Type III-B immunity in Pyrococcus furiosus (Pfu) are regulated by target RNA features and second messenger signaling events. In vivo mutational analyses reveal that either the DNase activity of Cas10 or the RNase activity of Csx1 can effectively direct successful anti-plasmid immunity. Biochemical analyses confirmed that the Cas10 Palm domains convert ATP into cyclic oligoadenylate (cOA) compounds that activate the ribonuclease activity of Pfu Csx1. Furthermore, we show that the HEPN domain of the adenosine-specific endoribonuclease, Pfu Csx1, degrades cOA signaling molecules to provide an auto-inhibitory off-switch of Csx1 activation. Activation of both the DNase and cOA generation activities require target RNA binding and recognition of distinct target RNA 3' protospacer flanking sequences. Our results highlight the complex regulatory mechanisms controlling Type III CRISPR immunity.

Indexed as

CRISPR-Cas SystemsArchaeal ProteinsCatalytic DomainCRISPR-Associated ProteinsDeoxyribonucleasesEndoribonucleasesPlasmidsProtein DomainsPyrococcus furiosusRibonucleoproteinsSecond Messenger SystemsArchaeal ProteinsCRISPR-Associated ProteinsDeoxyribonucleasesEndoribonucleasesRibonucleoproteins

Identifiers

PMID32198888
PMCPMC7192623
OpenAlexW3012634279

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.