Evidence map›Paper›PMID 32198605›Full record

ArticleVirus genes2020

Evolutionary and recombination analysis of porcine reproductive and respiratory syndrome isolates in China.

Zhendong Zhang, Xiangyang Qu, Hongliang Zhang, Xudong Tang, Ting Bian, Yingjun Sun, Mingming Zhou, Fubo Ren, Ping Wu

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Zhendong ZhangSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, 212018, China.
Xiangyang QuTECH-BANK CO., LTD, Shanghai, 200233, China.
Hongliang ZhangState Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin, 150001, China.
Xudong TangSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, 212018, China.
Ting BianSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, 212018, China.
Yingjun SunTECH-BANK CO., LTD, Shanghai, 200233, China.
Mingming ZhouTECH-BANK CO., LTD, Shanghai, 200233, China.
Fubo RenTECH-BANK CO., LTD, Shanghai, 200233, China.
Ping WuSchool of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, 212018, China. wp4114@163.com.ORCID https://orcid.org/0000-0003-0601-5142
Jiangsu University of Science and Technology · CNChinese Academy of Agricultural Sciences · CN

Funding

National Natural Science Foundation of China 31502016
6 · The paper itself

Abstract

Seven strains of porcine reproductive and respiratory syndrome virus (PRRSV) were isolated from 2014 to 2017 in the Shandong province of China and their genomes were sequenced and analyzed. Results showed that all seven of the isolates belong to PRRSV 2, and are clustered into four lineages (lineage 1, 3, 5 and 8) based on comparisons of the ORF5 gene. Comparative analysis of genomes and specific amino acid sites revealed that three of the strains (SDwh1402, SDwh1602 and SDwh1701) have evolved directly from modified live virus (MLV) JXA1-P80, TJM-F92 and IngelvacPRRS. Further recombination analysis revealed that two of the strains (SDyt1401 and SDwh1601) were the result of a recombination event between MLVs JXA1-P80 and NADC30 while two other strains (SDwh1403 and SDqd1501) were the result of recombination between MLVs IngelvacPRRS and NADC30 and HP-PRRSV and QYYZ, respectively. Our results add to the data on MLV evolution and PRRSV recombination and provide a better understanding of the epidemiology of PRRSV in China.

Indexed as

Evolution, MolecularGenetic VariationRecombination, GeneticAnimalsChinaGenome, ViralGenomicsPhylogenyPorcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusSwineEvolutionModified-live virus (MLV)Porcine reproductive and respiratory syndrome virus (PRRSV)Recombination

Identifiers

PMID32198605
OpenAlexW3010871576

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.