Evidence map›Paper›PMID 32198538›Full record

ArticleBulletin of mathematical biology2020

Coloured Noise from Stochastic Inflows in Reaction-Diffusion Systems.

Michael F Adamer, Heather A Harrington, Eamonn A Gaffney, Thomas E Woolley

Abstract read
In one paragraph

Article in Bulletin of mathematical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Modern perspectives on near-equilibrium analysis of Turing systems.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2021
    Review
  4. Bespoke Turing Systems.Bulletin of mathematical biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Michael F AdamerWolfson Centre for Mathematical Biology, Mathematical Institute, University of Oxford, Oxford, UK. mikeadamer@gmail.com.ORCID http://orcid.org/0000-0002-8996-7167
Heather A HarringtonWolfson Centre for Mathematical Biology, Mathematical Institute, University of Oxford, Oxford, UK.
Eamonn A GaffneyWolfson Centre for Mathematical Biology, Mathematical Institute, University of Oxford, Oxford, UK.
Thomas E WoolleyCardiff School of Mathematics, Cardiff University, Cardiff, UK.

Funding

Engineering and Physical Sciences Research Council EP/G03706X/1
6 · The paper itself

Abstract

In this paper, we present a framework for investigating coloured noise in reaction-diffusion systems. We start by considering a deterministic reaction-diffusion equation and show how external forcing can cause temporally correlated or coloured noise. Here, the main source of external noise is considered to be fluctuations in the parameter values representing the inflow of particles to the system. First, we determine which reaction systems, driven by extrinsic noise, can admit only one steady state, so that effects, such as stochastic switching, are precluded from our analysis. To analyse the steady-state behaviour of reaction systems, even if the parameter values are changing, necessitates a parameter-free approach, which has been central to algebraic analysis in chemical reaction network theory. To identify suitable models, we use tools from real algebraic geometry that link the network structure to its dynamical properties. We then make a connection to internal noise models and show how power spectral methods can be used to predict stochastically driven patterns in systems with coloured noise. In simple cases, we show that the power spectrum of the coloured noise process and the power spectrum of the reaction-diffusion system modelled with white noise multiply to give the power spectrum of the coloured noise reaction-diffusion system.

Indexed as

Models, BiologicalAlgorithmsAnimalsBiochemical PhenomenaBody PatterningComputer SimulationDevelopmental BiologyDiffusionMathematical ConceptsSignal-To-Noise RatioSpatio-Temporal AnalysisStochastic ProcessesSystems BiologySystems TheoryChemical reaction networksColoured noiseInjectivity criterionPower spectraReaction–diffusion

Identifiers

PMID32198538
PMCPMC7083815

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.