Evidence map›Paper›PMID 32198522›Full record

ArticleJournal of experimental botany2020

Characterization of a sweet basil acyltransferase involved in eugenol biosynthesis.

Niha Dhar, Sreelatha Sarangapani, Vaishnavi Amarr Reddy, Nadimuthu Kumar, Deepa Panicker, Jingjing Jin, Nam-Hai Chua, Rajani Sarojam

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

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  15. The genome sequence of tetraploid sweet basil, Ocimum basilicum L., provides tools for advanced genome editing and molecular breeding.DNA research : an international journal for rapid publication of reports on genes and genomes · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 3 countries.

Niha DharTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore.
Sreelatha SarangapaniTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore.
Vaishnavi Amarr ReddyTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore.
Nadimuthu KumarTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore.
Deepa PanickerTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore.
Jingjing JinTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore.
Nam-Hai ChuaTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore.
Rajani SarojamTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore.
Temasek Life Sciences Laboratory · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sweet basil (Ocimum basilicum) plants produce its characteristic phenylpropene-rich essential oil in specialized structures known as peltate glandular trichomes (PGTs). Eugenol and chavicol are the major phenylpropenes produced by sweet basil varieties whose synthetic pathways are not fully elucidated. Eugenol is derived from coniferyl acetate by a reaction catalysed by eugenol synthase. An acyltransferase is proposed to convert coniferyl alcohol to coniferyl acetate which is the first committed step towards eugenol synthesis. Here, we perform a comparative next-generation transcriptome sequencing of different tissues of sweet basil, namely PGT, leaf, leaf stripped of PGTs (leaf-PGT), and roots, to identify differentially expressed transcripts specific to PGT. From these data, we identified a PGT-enriched BAHD acyltransferase gene ObCAAT1 and functionally characterized it. In vitro coupled reaction of ObCAAT1 with eugenol synthase in the presence of coniferyl alcohol resulted in eugenol production. Analysis of ObCAAT1-RNAi transgenic lines showed decreased levels of eugenol and accumulation of coniferyl alcohol and its derivatives. Coniferyl alcohol acts as a common substrate for phenylpropene and lignin biosynthesis. No differences were found in total lignin content of PGTs and leaves of transgenic lines, indicating that phenylpropene biosynthesis is not coupled to lignification in sweet basil.

Indexed as

Ocimum basilicumAcyltransferasesEugenolPlant LeavesTrichomesAcyltransferasesEugenolBAHD acyltransferaseconiferyl alcoholeugenolligninphenylpropenesweet basil (Ocimum basilicum)

Identifiers

PMID32198522
PMCPMC7307857
OpenAlexW3011519277

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.