ArticleJournal of chemical information and modeling2020
MAINMASTseg: Automated Map Segmentation Method for Cryo-EM Density Maps with Symmetry.
Article in Journal of chemical information and modeling, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed, 16 citations in OpenAlex.
- Interactive segmentation of membrane and membrane-mimic densities in cryo-EM maps.Acta crystallographica. Section D, Structural biology · 2026Article
- DomainFit: Identification of protein domains in cryo-EM maps at intermediate resolution using AlphaFold2-predicted models.Structure (London, England : 1993) · 2024Article
- Outcomes of the EMDataResource cryo-EM Ligand Modeling Challenge.Nature methods · 2024Article
- DeepMainmast: integrated protocol of protein structure modeling for cryo-EM with deep learning and structure prediction.Nature methods · 2024Article
- Integrated Protocol of Protein Structure Modeling for Cryo-EM with Deep Learning and Structure Prediction.bioRxiv : the preprint server for biology · 2023Article
- Deep learning for reconstructing protein structures from cryo-EM density maps: Recent advances and future directions.Current opinion in structural biology · 2023Review
- CryoFold: determining protein structures and data-guided ensembles from cryo-EM density maps.Matter · 2021Article
- EvoSeg: Automated Electron Microscopy Segmentation through Random Forests and Evolutionary Optimization.Biomimetics (Basel, Switzerland) · 2021Article
- Faces of Contemporary CryoEM Information and Modeling.Journal of chemical information and modeling · 2020Article
Corrections and comments
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Authors and funding
3 authors at 2 institutions in 2 countries.
Funding
Abstract
For structural interpretation of cryo-electron microscopy (cryo-EM) density maps that contain multiple chains, map segmentation is an important step. If a map is segmented accurately into regions of individual protein components, the structure of each protein can be separately modeled using an existing modeling tool. Here, we developed new software, MAINMASTseg, for segmenting maps with symmetry. MAINMASTseg is an extension of the MAINMAST
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.