Evidence map›Paper›PMID 32195924›Full record

SynthesisMedicine2020

Expression of SREBP2 and cholesterol metabolism related genes in TCGA glioma cohorts.

Dali Li, Shenglan Li, Allen Z Xue, Laura A Smith Callahan, Ying Liu

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. NOVA1 acts as an oncogenic RNA-binding protein to regulate cholesterol homeostasis in human glioblastoma cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Dali LiThe Vivian L. Smith Department of Neurosurgery, McGovern Medical School.
Shenglan LiThe Vivian L. Smith Department of Neurosurgery, McGovern Medical School.
Allen Z XueThe Vivian L. Smith Department of Neurosurgery, McGovern Medical School.
Laura A Smith CallahanThe Vivian L. Smith Department of Neurosurgery, McGovern Medical School.
Ying LiuThe Vivian L. Smith Department of Neurosurgery, McGovern Medical School.
Brown Foundation · US

Funding

Reconnecting the injured cervical spinal cord by transplanted human iPSC-derived neural progenitorsR01NS110707 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI LIU, YING · 2019 to 2023
$1.7M
NINDS NIH HHS R01 NS110707
6 · The paper itself

Abstract

Diffuse gliomas are the most common primary brain tumors. The Cancer Genome Atlas (TCGA) database provides correlative evidence between altered molecular pathways and gliomas. Dysregulated cholesterol homeostasis emerges as a potential indicator of the pathogenesis of gliomas.Mining large cohorts from the TCGA together with database from the Chinese Glioma Genome Atlas (CGGA) for confirmation, we compared gene expression of cholesterol synthesis master regulator SREBP2 and its regulatory networks in low grade glioma (LGG) and glioblastoma (GBM).Our analysis shows that expression of SREBP2 and related genes is lower in GBM than in LGG, indicating that cholesterol metabolism processes, including de novo synthesis, cholesterol uptakes, and cholesterol conversion and efflux, are suppressed in GBM.Overall, our data suggests that SREBP2 transcript could serve as a potential prognosis marker or therapeutic target in diffuse glioma including GBM.

Indexed as

AgedBiomarkers, TumorBrain NeoplasmsCholesterolDatabases, FactualGlioblastomaGliomaHumansKaplan-Meier EstimateMiddle AgedNeoplasm GradingObservational Studies as TopicRNA, MessengerSterol Regulatory Element Binding Protein 2Biomarkers, TumorCholesterolRNA, MessengerSterol Regulatory Element Binding Protein 2

Identifiers

PMID32195924
PMCPMC7220679
OpenAlexW3011450914

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.