Evidence map›Paper›PMID 32195666›Full record

ArticleeLife2020

An H3K9 methylation-dependent protein interaction regulates the non-enzymatic functions of a putative histone demethylase.

Gulzhan Raiymbek, Sojin An, Nidhi Khurana, Saarang Gopinath, Ajay Larkin, Saikat Biswas, Raymond C Trievel, Uhn-Soo Cho, Kaushik Ragunathan

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Characterization of the Swi6/HP1 binding motif in its partner protein reveals the basis for the functional divergence of the HP1 family proteins in fission yeast.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  5. Potential Strategies Applied byPathogens (Basel, Switzerland) · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Sequence Dependence in Nucleosome Dynamics.The journal of physical chemistry. B · 2024
    Article
  10. Review
  11. PROTACs Targeting Epigenetic Proteins.Acta materia medica · 2023
    Article
  12. Article
  13. Article
  14. Review
  15. Mechanisms of chromatin-based epigenetic inheritance.Science China. Life sciences · 2022
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Gulzhan RaiymbekDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.
Sojin AnDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.
Nidhi KhuranaDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.
Saarang GopinathDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.
Ajay LarkinDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.ORCID 0000-0002-5967-9535
Saikat BiswasDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.
Raymond C TrievelDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.
Uhn-Soo ChoDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.ORCID 0000-0002-6992-2455
Kaushik RagunathanDepartment of Biological Chemistry, University of Michigan, Ann Arbor, United States.ORCID 0000-0003-4776-8589
University of Michigan · US

Funding

PREDOCTORAL TRAINING IN GENETICST32GM007544 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1985 to 2022
$11.3M
The molecular mechanisms of nutrient- and stress-dependent mTORC1 regulation mediated by human Sestrin2.R01DK111465 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHO, UHN-SOO · 2016 to 2020
$2.4M
National Science Foundation CHE-1508492NIDDK NIH HHS DK111465NIGMS NIH HHS T32 GM007544
6 · The paper itself

Abstract

H3K9 methylation (H3K9me) specifies the establishment and maintenance of transcriptionally silent epigenetic states or heterochromatin. The enzymatic erasure of histone modifications is widely assumed to be the primary mechanism that reverses epigenetic silencing. Here, we reveal an inversion of this paradigm where a putative histone demethylase Epe1 in fission yeast, has a non-enzymatic function that opposes heterochromatin assembly. Mutations within the putative catalytic JmjC domain of Epe1 disrupt its interaction with Swi6

Indexed as

Chromosomal Proteins, Non-HistoneHistone DemethylasesHistonesJumonji Domain-Containing Histone DemethylasesMethylationMutationNuclear ProteinsProtein BindingSchizosaccharomycesSchizosaccharomyces pombe ProteinsChromosomal Proteins, Non-Histoneepe1 protein, S pombeHistone DemethylasesHistonesJumonji Domain-Containing Histone DemethylasesNuclear ProteinsSchizosaccharomyces pombe ProteinsSwi6 protein, S pombebiochemistrychemical biologychromosomesdemethylaseepigeneticsgene expressionheterochromatininheritanceS. pombe

Identifiers

PMID32195666
PMCPMC7192584
OpenAlexW3010962943

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.