Evidence map›Paper›PMID 32195335›Full record

ArticleScience advances2020

An array of 60,000 antibodies for proteome-scale antibody generation and target discovery.

Zhaohui Wang, Yang Li, Bing Hou, Mira I Pronobis, Mingqiao Wang, Yuemeng Wang, Guangcun Cheng, Weining Weng, Yiqiang Wang, Yanfang Tang and 33 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 37 citations in OpenAlex.

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  8. PhIP-Seq: methods, applications and challenges.Frontiers in bioinformatics · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

43 authors at 13 institutions in 7 countries.

Zhaohui WangSchool of Life Sciences, Northwest University, Xi'an, Shanxi 710069, China.ORCID 0000-0002-6291-7338
Yang LiShanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-3182-6169
Bing HouSchool of Life Sciences, Northwest University, Xi'an, Shanxi 710069, China.ORCID 0000-0002-8348-3831
Mira I PronobisDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.ORCID 0000-0002-0052-1186
Mingqiao WangAbmart, 333 Guiping Road, Shanghai 200033, China.
Yuemeng WangAbmart, 333 Guiping Road, Shanghai 200033, China.
Guangcun ChengAbmart, 333 Guiping Road, Shanghai 200033, China.
Weining WengAbmart, 333 Guiping Road, Shanghai 200033, China.ORCID 0000-0002-2530-4284
Yiqiang WangAbmart, 333 Guiping Road, Shanghai 200033, China.
Yanfang TangAbmart, 333 Guiping Road, Shanghai 200033, China.
Xuefan XuAbmart, 333 Guiping Road, Shanghai 200033, China.
Rong PanAbmart, 333 Guiping Road, Shanghai 200033, China.
Fei LinAbmart, 333 Guiping Road, Shanghai 200033, China.
Nan WangShanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China.
Ziqing ChenShanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China.
Shiwei WangState Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
Luyan Zulie MaState Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
Yangrui LiGuangxi Key Laboratory of Sugarcane Genetic Improvement/Key Laboratory of Sugarcane Biotechnology and Genetic Improvement (Guangxi), Ministry of Agriculture, Nanning, Guangxi 530007, China.ORCID 0000-0002-7559-9244
Dongliang HuangGuangxi Key Laboratory of Sugarcane Genetic Improvement/Key Laboratory of Sugarcane Biotechnology and Genetic Improvement (Guangxi), Ministry of Agriculture, Nanning, Guangxi 530007, China.ORCID 0000-0002-9112-9453
Li JiangKey Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
Zhiqiang WangZhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan 450009, China.
Wenfang ZengZhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan 450009, China.
Ying ZhangZhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan 450009, China.
Xuemei DuInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100083, China.ORCID 0000-0002-1781-7207
Ying LinState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China.
Zhiqing LiState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China.
Qingyou XiaState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China.
Jing GengDepartment of Pulmonary and Critical Care Medicine, Center of Respiratory Medicine, China-Japan Friendship Hospital, National Clinical Research Center for Respiratory Diseases, Beijing 100029, China.
Huaping DaiDepartment of Pulmonary and Critical Care Medicine, Center of Respiratory Medicine, China-Japan Friendship Hospital, National Clinical Research Center for Respiratory Diseases, Beijing 100029, China.
Yuan YuSchool of Life Sciences, Northwest University, Xi'an, Shanxi 710069, China.
Xiao-Dong ZhaoSchool of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-2630-7161
Zheng YuanSchool of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0003-1254-0410
Jian YanLudwig Institute for Cancer Research, 9500 Gilman Dr., La Jolla, CA 92093, USA.ORCID 0000-0002-1267-2870
Qinghua NieCollege of Animal Science, South China Agricultural University, Guangzhou, Guangdong 510642, China.ORCID 0000-0003-3934-3820
Xiquan ZhangCollege of Animal Science, South China Agricultural University, Guangzhou, Guangdong 510642, China.
Kun WangInstitute for Advanced Studies and College of Life Sciences, Wuhan University, Wuhan, China.ORCID 0000-0001-5910-1568
Fulin ChenSchool of Life Sciences, Northwest University, Xi'an, Shanxi 710069, China.
Qin ZhangKey Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture and National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
Yuxian ZhuInstitute for Advanced Studies and College of Life Sciences, Wuhan University, Wuhan, China.
Susan ZhengDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.
Kenneth D PossDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.ORCID 0000-0002-6743-5709
Sheng-Ce TaoShanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-9210-1823
Xun MengSchool of Life Sciences, Northwest University, Xi'an, Shanxi 710069, China.ORCID 0000-0002-0494-248X
Northwest University · CNShanghai Jiao Tong University · CNDuke University · USSouthwest University · CNSugarcane Research Center (Brazil) · BRChina-Japan Friendship Hospital · CNChinese Academy of Sciences · CNMinistry of Agriculture · IDSouth China Agricultural University · CNWuhan University · CNZhengzhou Fruit Research Institute · CNChinese Academy of Agricultural Sciences · CNKarolinska Institutet · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antibodies are essential for elucidating gene function. However, affordable technology for proteome-scale antibody generation does not exist. To address this, we developed Proteome Epitope Tag Antibody Library (PETAL) and its array. PETAL consists of 62,208 monoclonal antibodies (mAbs) against 15,199 peptides from diverse proteomes. PETAL harbors binders for a great multitude of proteins in nature due to antibody multispecificity, an intrinsic antibody feature. Distinctive combinations of 10,000 to 20,000 mAbs were found to target specific proteomes by array screening. Phenotype-specific mAb-protein pairs were found for maize and zebrafish samples. Immunofluorescence and flow cytometry mAbs for membrane proteins and chromatin immunoprecipitation-sequencing mAbs for transcription factors were identified from respective proteome-binding PETAL mAbs. Differential screening of cell surface proteomes of tumor and normal tissues identified internalizing tumor antigens for antibody-drug conjugates. By finding high-affinity mAbs at a fraction of current time and cost, PETAL enables proteome-scale antibody generation and target discovery.

Indexed as

A549 CellsAnimalsAntibodies, Monoclonal, Murine-DerivedEpitopesHEK293 CellsHeLa CellsHep G2 CellsHL-60 CellsHumansHuman Umbilical Vein Endothelial CellsJurkat CellsK562 CellsMCF-7 CellsMicePC-3 CellsPeptidesAntibodies, Monoclonal, Murine-DerivedEpitopesPeptidesProteome

Identifiers

PMID32195335
PMCPMC7065887
OpenAlexW3011155739

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.