Evidence map›Paper›PMID 32195281›Full record

ArticleIranian journal of biotechnology2019

RNA-Seq Bayesian Network Exploration of Immune System in Bovine.

Elham Behdani, Mostafa Ghaderi-Zefrehei, Farjad Rafeie, Mohammad Reza Bakhtiarizadeh, Hedayatollah Roshanfeker, Jamal Fayazi

Open access · diamondAbstract read
In one paragraph

Article in Iranian journal of biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. The Nero Lucano Pig Breed: Recovery and Variability.Animals : an open access journal from MDPI · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Elham BehdaniDepartment of Animal Science, Faculty of Animal and Food Science, Khuzestan Agricultural Sciences and Natural Resources University, Mollasani, Khuzestan, Iran.
Mostafa Ghaderi-ZefreheiDepartment of Animal Science, Yasouj University, Yasouj, Iran.
Farjad RafeieDepartment of Agricultural Biotechnology, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran.
Mohammad Reza BakhtiarizadehDepartment of Animal and Poultry Science, College of Aburaihan, University of Tehran, Tehran, Iran.
Hedayatollah RoshanfekerDepartment of Animal Science, Faculty of Animal and Food Science, Khuzestan Agricultural Sciences and Natural Resources University, Mollasani, Khuzestan, Iran.
Jamal FayaziDepartment of Animal Science, Faculty of Animal and Food Science, Khuzestan Agricultural Sciences and Natural Resources University, Mollasani, Khuzestan, Iran.
University of Tehran · IRUniversity of Guilan · IRYasouj University · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe stress is one of main factors effects on production system. Several factors (both genetic and environmental elements) regulate immune response to stress.

objectivesIn order to determine the major immune system regulatory genes underlying stress responses, a learning Bayesian network approach for those regulatory genes was applied to RNA-Seq data from a bovine leukocyte model system. MATERIAL AND

methodsThe transcriptome dataset GSE37447 was used from GEO and a Bayesian network on differentially expressed genes was learned to investigate the gene regulatory network.

resultsApplying the method produced a strongly interconnected network with four genes (

conclusionsOverall, the results might be used in transcriptomic-assisted selection and design of new drug targets to treat stress-related problems in bovines.

Indexed as

CattleGenesRNAStress

Identifiers

PMID32195281
PMCPMC7080973
OpenAlexW2942988856

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.