Evidence map›Paper›PMID 32194617›Full record

ArticleFrontiers in genetics2020

Reconstruction and Validation of a Genome-Scale Metabolic Model of

Christian S Jensen, Charles J Norsigian, Xin Fang, Xiaohui C Nielsen, Jens Jørgen Christensen, Bernhard O Palsson, Jonathan M Monk

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. ModellingCurrent research in microbial sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Christian S JensenThe Regional Department of Clinical Microbiology, Region Zealand, Slagelse, Denmark.
Charles J NorsigianDepartment of Bioengineering, University of California, San Diego, San Diego, CA, United States.
Xin FangDepartment of Bioengineering, University of California, San Diego, San Diego, CA, United States.
Xiaohui C NielsenThe Regional Department of Clinical Microbiology, Region Zealand, Slagelse, Denmark.
Jens Jørgen ChristensenThe Regional Department of Clinical Microbiology, Region Zealand, Slagelse, Denmark.
Bernhard O PalssonDepartment of Bioengineering, University of California, San Diego, San Diego, CA, United States.
Jonathan M MonkDepartment of Bioengineering, University of California, San Diego, San Diego, CA, United States.
Region Zealand · DKUniversity of California, San Diego · USTechnical University of Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mitis group of streptococci (MGS) is a member of the healthy human microbiome in the oral cavity and upper respiratory tract. Troublingly, some MGS are able to escape this niche and cause infective endocarditis, a severe and devastating disease. Genome-scale models have been shown to be valuable in investigating metabolism of bacteria. Here we present the first genome-scale model, iCJ415, for

Indexed as

Biolog phenotypic profilingconstraint-based modelinggenome-scale reconstructionmitis group of streptococciStreptococcus oralis

Identifiers

PMID32194617
PMCPMC7063969
OpenAlexW3009433789

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.