Evidence map›Paper›PMID 32192767›Full record

ArticleBiochemical and biophysical research communications2020

FKBP12 dimerization mutations effect FK506 binding and differentially alter calcineurin inhibition in the human pathogen Aspergillus fumigatus.

Praveen R Juvvadi, Benjamin G Bobay, Sophie M C Gobeil, D Christopher Cole, Ronald A Venters, Joseph Heitman, Leonard D Spicer, William J Steinbach

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Potential Antifungal Targets forInternational journal of molecular sciences · 2022
    Review
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Praveen R JuvvadiDivision of Pediatric Infectious Diseases, Department of Pediatrics, Duke University Medical Center, Durham, NC, 27710, USA. Electronic address: praveen.juvvadi@duke.edu.
Benjamin G BobayDuke University NMR Center, Duke University Medical Center, Durham, NC, 27710, USA; Department of Biochemistry, Durham, NC, 27710, USA; Department of Radiology, Duke University, Durham, NC, 27710, USA.
Sophie M C GobeilDepartment of Biochemistry, Durham, NC, 27710, USA; Department of Radiology, Duke University, Durham, NC, 27710, USA.
D Christopher ColeDivision of Pediatric Infectious Diseases, Department of Pediatrics, Duke University Medical Center, Durham, NC, 27710, USA.
Ronald A VentersDuke University NMR Center, Duke University Medical Center, Durham, NC, 27710, USA; Department of Biochemistry, Durham, NC, 27710, USA; Department of Radiology, Duke University, Durham, NC, 27710, USA.
Joseph HeitmanDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC, 27710, USA.
Leonard D SpicerDuke University NMR Center, Duke University Medical Center, Durham, NC, 27710, USA; Department of Biochemistry, Durham, NC, 27710, USA; Department of Radiology, Duke University, Durham, NC, 27710, USA.
William J SteinbachDivision of Pediatric Infectious Diseases, Department of Pediatrics, Duke University Medical Center, Durham, NC, 27710, USA; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC, 27710, USA. Electronic address: bill.steinbach@duke.edu.
Duke University · USDuke Medical Center · US

Funding

Trehalose Pathway for Antifungal Targets and InhibitorsP01AI104533 · NIAID · DUKE UNIVERSITY · PI PERFECT, JOHN R. · 2015 to 2019
$9.0M
Structural Biological Development of Fungal-Specific Calcineurin InhibitorsR01AI112595 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH, SCHUMACHER, MARIA · 2014 to 2017
$2.5M
Structural Biological Development of Fungal-Specific Calcineurin InhibitorsR56AI112595 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH, HONG, JIYONG · 2020 to 2020
$669k
The Genetic Architecture of Virulence in Cryptococcus neoformansR56AI123502 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH, MAGWENE, PAUL MITAARI · 2017 to 2017
$186k
NIAID NIH HHS P01 AI104533NIAID NIH HHS R01 AI112595NIAID NIH HHS R56 AI112595NIAID NIH HHS R56 AI123502
6 · The paper itself

Abstract

The 12-kDa FK506-binding protein (FKBP12) is the target of the commonly used immunosuppressive drug FK506. The FKBP12-FK506 complex binds to calcineurin and inhibits its activity, leading to immunosuppression and preventing organ transplant rejection. Our recent characterization of crystal structures of FKBP12 proteins in pathogenic fungi revealed the involvement of the 80's loop residue (Pro90) in the active site pocket in self-substrate interaction providing novel evidence on FKBP12 dimerization in vivo. The 40's loop residues have also been shown to be involved in reversible dimerization of FKBP12 in the mammalian and yeast systems. To understand how FKBP12 dimerization affects FK506 binding and influences calcineurin function, we generated Aspergillus fumigatus FKBP12 mutations in the 40's and 50's loop (F37 M/L; W60V). Interestingly, the mutants exhibited variable FK506 susceptibility in vivo indicating differing dimer strengths. In comparison to the 80's loop P90G and V91C mutants, the F37 M/L and W60V mutants exhibited greater FK506 resistance, with the F37M mutation showing complete loss in calcineurin binding in vivo. Molecular dynamics and pulling simulations for each dimeric FKBP12 protein revealed a two-fold increase in dimer strength and significantly higher number of contacts for the F37M, F37L, and W60V mutations, further confirming their varying degree of impact on FK506 binding and calcineurin inhibition in vivo.

Indexed as

Protein MultimerizationAmino Acid SequenceAspergillus fumigatusCalcineurinCalcineurin InhibitorsComputer SimulationFungal ProteinsHumansMutant ProteinsMutationProtein BindingProtein Structure, SecondaryTacrolimusTacrolimus Binding Protein 1ACalcineurinCalcineurin InhibitorsFungal ProteinsMutant ProteinsTacrolimusTacrolimus Binding Protein 1AAspergillusCalcineurinDimerizationFK506FKBP12Molecular dynamics

Identifiers

PMID32192767
PMCPMC7188580
OpenAlexW3011974553

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.