Evidence map›Paper›PMID 32192001›Full record

ArticleAnimals : an open access journal from MDPI2020

The German Shorthair Pointer Dog Breed (

Antonio Boccardo, Stefano Paolo Marelli, Davide Pravettoni, Alessandro Bagnato, Giuseppe Achille Busca, Maria Giuseppina Strillacci

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Antonio BoccardoDepartment of Veterinary Medicine, Università degli Studi di Milano, Via dell'Università 6, 26900 Lodi, Italy.ORCID 0000-0003-0051-6990
Stefano Paolo MarelliDepartment of Veterinary Medicine, Università degli Studi di Milano, Via dell'Università 6, 26900 Lodi, Italy.
Davide PravettoniDepartment of Veterinary Medicine, Università degli Studi di Milano, Via dell'Università 6, 26900 Lodi, Italy.ORCID 0000-0003-3338-6053
Alessandro BagnatoDepartment of Veterinary Medicine, Università degli Studi di Milano, Via dell'Università 6, 26900 Lodi, Italy.
Giuseppe Achille BuscaCentro Clinico-Veterinario e Zootecnico-Sperimentale, Università degli Studi di Milano, Via dell'Università 6, 26900 Lodi, Italy.
Maria Giuseppina StrillacciDepartment of Veterinary Medicine, Università degli Studi di Milano, Via dell'Università 6, 26900 Lodi, Italy.ORCID 0000-0002-8972-1730
University of Milan · IT

Funding

Università degli Studi di Milano LINEA2_ABOCC_AA_2017
6 · The paper itself

Abstract

The German Shorthaired Pointer (GSHP) is a breed worldwide known for its hunting versatility. Dogs of this breed are appreciated as valuable companions, effective trackers, field trailers and obedience athletes. The aim of the present work is to describe the genomic architecture of the GSHP breed and to analyze inbreeding levels under a genomic and a genealogic perspective. A total of 34 samples were collected (24 Italian, 10 USA), and the genomic and pedigree coefficients of inbreeding have been calculated. A total of 3183 runs of homozygosity (ROH) across all 34 dogs have been identified. The minimum and maximum number of Single Nucleotide Polymorphisms (SNPs) defining all ROH are 40 and 3060. The mean number of ROH for the sample was 93.6. ROH were found on all chromosomes. A total of 854 SNPs (TOP_SNPs) defined 11 ROH island regions (TOP_ROH), in which some gene already associated with behavioral and morphological canine traits was annotated. The proportion of averaged observed homozygotes estimated on total number of SNPs was 0.70. The genomic inbreeding coefficient based on ROH was 0.17. The mean inbreeding based on genealogical information resulted 0.023. The results describe a low inbred population with quite a good level of genetic variability.

Indexed as

doggenetic diversityinbreedingROHrun of homozygositySNP

Identifiers

PMID32192001
PMCPMC7143860
OpenAlexW3012399592

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.