Evidence map›Paper›PMID 32191849›Full record

ReviewTrends in parasitology2020

Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes.

Inna Aphasizheva, Juan Alfonzo, Jason Carnes, Igor Cestari, Jorge Cruz-Reyes, H Ulrich Göringer, Stephen Hajduk, Julius Lukeš, Susan Madison-Antenucci, Dmitri A Maslov and 14 more

Open access · greenAbstract readReview
In one paragraph

Review in Trends in parasitology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
9.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 113 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. RNA Polymerase 1 inhibitors against African trypanosomesAntimicrobial agents and chemotherapy · 2026
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Assembly and Annotation of Kinetoplastid and Diplonemid Mitochondrial Genomes.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  13. Biochemistry of Diplonemids.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 15 institutions in 7 countries.

Inna AphasizhevaDepartment of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA 02118, USA. Electronic address: innaaf@bu.edu.
Juan AlfonzoDepartment of Microbiology, The Ohio State University, Columbus, OH 43210, USA.
Jason CarnesCenter for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA 98109, USA.
Igor CestariInstitute of Parasitology, McGill University, 21,111 Lakeshore Road, Ste-Anne-de-Bellevue, H9X3V9, Québec, Canada.
Jorge Cruz-ReyesDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
H Ulrich GöringerDepartment of Molecular Genetics, Darmstadt University of Technology, 64287 Darmstadt, Germany.
Stephen HajdukDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, USA.
Julius LukešInstitute of Parasitology, Biology Centre, Czech Academy of Sciences and Faculty of Sciences, University of South Bohemia, České Budějovice (Budweis), Czech Republic.
Susan Madison-AntenucciParasitology Laboratory, Wadsworth Center, New York State Department of Health, Albany, NY 12201, USA.
Dmitri A MaslovDepartment of Molecular, Cell, and Systems Biology, University of California - Riverside, Riverside, CA 92521, USA.
Suzanne M McDermottCenter for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA 98109, USA.
Torsten OchsenreiterInstitute of Cell Biology, University of Bern, Baltzerstrasse 4, Bern CH-3012, Switzerland.
Laurie K ReadDepartment of Microbiology and Immunology, University at Buffalo, Jacobs School of Medicine and Biomedical Sciences, Buffalo, NY 14203, USA.
Reza SalavatiInstitute of Parasitology, McGill University, 21,111 Lakeshore Road, Ste-Anne-de-Bellevue, H9X3V9, Québec, Canada.
Achim SchnauferInstitute of Immunology and Infection Research, University of Edinburgh, Edinburgh EH9 3FL, UK.
André SchneiderDepartment of Chemistry and Biochemistry, University of Bern, Bern CH-3012, Switzerland.
Larry SimpsonDepartment of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, CA90095, USA.
Kenneth StuartCenter for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA 98109, USA.
Vyacheslav YurchenkoLife Science Research Centre, Faculty of Science, University of Ostrava, Ostrava, Czech Republic; Martsinovsky Institute of Medical Parasitology, Sechenov University, Moscow, Russia.
Z Hong ZhouDepartment of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, CA90095, USA.
Alena ZíkováInstitute of Parasitology, Biology Centre, Czech Academy of Sciences and Faculty of Sciences, University of South Bohemia, České Budějovice (Budweis), Czech Republic.
Liye ZhangSchool of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China.
Sara ZimmerUniversity of Minnesota Medical School, Duluth campus, Duluth, MN 55812, USA.
Ruslan AphasizhevDepartment of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA 02118, USA.
Boston University · USInfectious Disease Research Institute · USMcGill University · CAUniversity of Bern · CHUniversity of California, Los Angeles · USInstitute of Parasitology · CZTechnical University of Darmstadt · DETexas A&M University · USThe Ohio State University · USUniversity Medical Center · USUniversity of California, Riverside · USUniversity of Edinburgh · GBUniversity of Georgia · USUniversity of Minnesota, Duluth · USWadsworth Center · US

Funding

MITOCHONDRIAL DNA OF NORMAL AND MUTANT TRYPANOSOMESR01AI014102 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI KENNETH D STUART · 1985 to 2026
$20.9M
Guide RNA Binding ComplexR01AI101057 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI Ruslan Afasizhev · 2012 to 2026
$6.0M
REPEAT-CONTAINING RNA BINDING PROTEINS OF TRYPANOSOMESR01AI113157 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI AFASIZHEVA, INNA · 2015 to 2024
$4.6M
Structures and Functions of RNA Editing TUTasesR01AI091914 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI AFASIZHEV, RUSLAN · 2011 to 2020
$4.4M
tRNA editing by deamination: Balancing affinity and specifictyR01GM084065 · NIGMS · OHIO STATE UNIVERSITY · PI ALFONZO, JUAN D · 2008 to 2021
$4.0M
Regulation of RNA editing in Trypansoma bruceiR01AI061580 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI READ, LAURIE K. · 2006 to 2015
$3.0M
Role of African Trypanosome Extracellular Vesicles in Infection and PathogenesisR01AI125487 · NIAID · UNIVERSITY OF GEORGIA · PI HAJDUK, STEPHEN L · 2017 to 2021
$1.9M
RNA Uridylytransferases of TrypanosomesR01AI064653 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI AFASIZHEV, RUSLAN · 2005 to 2009
$1.8M
Kinetoplastid RNA editingR01GM129041 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI READ, LAURIE K. · 2018 to 2021
$1.6M
Control of polyadenylation in the parasite mitochondrionR15AI135885 · NIAID · UNIVERSITY OF MINNESOTA DULUTH · PI ZIMMER, SARA LANA · 2018 to 2018
$441k
Functional characterization of RNA Editing Helicase 1R21AI139448 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI READ, LAURIE K. · 2018 to 2019
$439k
Medical Research Council MR/L019701/1NIAID NIH HHS R01 AI014102NIAID NIH HHS R01 AI061580NIAID NIH HHS R01 AI064653NIAID NIH HHS R01 AI091914NIAID NIH HHS R01 AI101057NIAID NIH HHS R01 AI113157NIAID NIH HHS R01 AI125487NIAID NIH HHS R15 AI135885NIAID NIH HHS R21 AI139448NIGMS NIH HHS R01 GM084065NIGMS NIH HHS R01 GM129041
6 · The paper itself

Abstract

Trypanosoma brucei spp. cause African human and animal trypanosomiasis, a burden on health and economy in Africa. These hemoflagellates are distinguished by a kinetoplast nucleoid containing mitochondrial DNAs of two kinds: maxicircles encoding ribosomal RNAs (rRNAs) and proteins and minicircles bearing guide RNAs (gRNAs) for mRNA editing. All RNAs are produced by a phage-type RNA polymerase as 3' extended precursors, which undergo exonucleolytic trimming. Most pre-mRNAs proceed through 3' adenylation, uridine insertion/deletion editing, and 3' A/U-tailing. The rRNAs and gRNAs are 3' uridylated. Historically, RNA editing has attracted major research effort, and recently essential pre- and postediting processing events have been discovered. Here, we classify the key players that transform primary transcripts into mature molecules and regulate their function and turnover.

Indexed as

AnimalsRNA EditingRNA, MitochondrialRNA, ProtozoanTrypanosoma brucei bruceiRNA, MitochondrialRNA, ProtozoankinetoplastmitochondriapolyadenylationRNA decayRNA editingTrypanosoma

Identifiers

PMID32191849
PMCPMC7083771
OpenAlexW3007303552

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.