Evidence map›Paper›PMID 32191706›Full record

ArticlePloS one2020

Reproducibility warning: The curious case of polyethylene glycol 6000 and spheroid cell culture.

Simona Serrati, Chiara Martinelli, Antonio Palazzo, Rosa Maria Iacobazzi, Mara Perrone, Quy K Ong, Zhi Luo, Ahmet Bekdemir, Giulia Pinto, Ornella Cavalleri and 5 more

Abstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Simona SerratiNanotechnology Laboratory, IRCCS Istituto Tumori "Giovanni Paolo II", Bari, Italy.
Chiara MartinelliIFOM-The FIRC Institute of Molecular Oncology, Milan, Italy.
Antonio PalazzoNanotechnology Laboratory, IRCCS Istituto Tumori "Giovanni Paolo II", Bari, Italy.
Rosa Maria IacobazziExperimental Pharmacology Laboratory, IRCCS Istituto Tumori "Giovanni Paolo II", Bari, Italy.
Mara PerroneNanotechnology Laboratory, IRCCS Istituto Tumori "Giovanni Paolo II", Bari, Italy.
Quy K OngInstitute of Materials, Ecole Polytechnique Federale de Lausanne (EPFL), Lausanne, Switzerland.
Zhi LuoInstitute of Materials, Ecole Polytechnique Federale de Lausanne (EPFL), Lausanne, Switzerland.
Ahmet BekdemirInstitute of Materials, Ecole Polytechnique Federale de Lausanne (EPFL), Lausanne, Switzerland.
Giulia PintoDepartment of Physics, University of Genoa, Genoa, Italy.ORCID 0000-0001-7007-6287
Ornella CavalleriDepartment of Physics, University of Genoa, Genoa, Italy.
Annalisa CutrignelliDepartment of Pharmacy- Pharmaceutical Sciences, University of Bari "Aldo Moro", Bari, Italy.
Valentino LaquintanaDepartment of Pharmacy- Pharmaceutical Sciences, University of Bari "Aldo Moro", Bari, Italy.
Nunzio DenoraDepartment of Pharmacy- Pharmaceutical Sciences, University of Bari "Aldo Moro", Bari, Italy.
Francesco StellacciInstitute of Materials, Ecole Polytechnique Federale de Lausanne (EPFL), Lausanne, Switzerland.
Silke KrolLaboratory for personalized medicine, National Institute of Gastroenterology IRCCS "S. de Bellis" Research Hospital, Castellana Grotte, Bari, Italy.ORCID 0000-0003-3108-9821

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reproducibility of results is essential for a well-designed and conducted experiment. Several reasons may originate failure in reproducing data, such as selective reporting, low statistical power, or poor analysis. In this study, we used PEG6000 samples from different distributors and tested their capability inducing spheroid formation upon surface coating. MALDI-MS, NMR, FTIR, and Triple SEC analysis of the different PEG60000s showed nearly identical physicochemical properties different, with only minor differences in mass and hydrodynamic radius, and AFM analysis showed no significant differences in the surface coatings obtained with the available PEG6000s. Despite these similarities, just one showed a highly reproducible formation of spheroids with different cell lines, such as HT-29, HeLa, Caco2, and PANC-1. Using the peculiar PEG6000 sample and a reference PEG6000 chosen amongst the others as control, we tested the effect of the cell/PEG interaction by incubating cells in the PEG solution prior to cell plating. These experiments indicate that the spheroid formation is due to direct interaction of the polymer with the cells rather than by interaction of cells with the coated surfaces. The experiments point out that for biological entities, such as cells or tissues, even very small differences in impurities or minimal variations in the starting product can have a very strong impact on the reproducibility of data.

Indexed as

Reproducibility of ResultsCaco-2 CellsCalorimetry, Differential ScanningCell Culture TechniquesChromatography, GelHeLa CellsHT29 CellsHumansMagnetic Resonance SpectroscopyMicroscopy, Atomic ForcePolyethylene GlycolsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationSpectroscopy, Fourier Transform InfraredSpheroids, CellularSurface PropertiesPolyethylene Glycol 6000Polyethylene Glycols

Identifiers

PMID32191706
PMCPMC7082040

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.