Evidence map›Paper›PMID 32191698›Full record

ArticlePLoS genetics2020

A Snf1-related nutrient-responsive kinase antagonizes endocytosis in yeast.

Jessica M Tumolo, Nathaniel L Hepowit, Samika S Joshi, Jason A MacGurn

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jessica M TumoloDepartment of Cell and Developmental Biology, Vanderbilt University, Nashville, Tennessee, United States of America.ORCID 0000-0002-1999-5672
Nathaniel L HepowitDepartment of Cell and Developmental Biology, Vanderbilt University, Nashville, Tennessee, United States of America.ORCID 0000-0002-7614-2756
Samika S JoshiDepartment of Cell and Developmental Biology, Vanderbilt University, Nashville, Tennessee, United States of America.
Jason A MacGurnDepartment of Cell and Developmental Biology, Vanderbilt University, Nashville, Tennessee, United States of America.ORCID 0000-0001-5063-259X
Vanderbilt University · US

Funding

Integrated Biological Systems Training in OncologyT32CA119925 · NCI · VANDERBILT UNIVERSITY · PI Vivian Gama, William Patrick Tansey · 2008 to 2026
$7.6M
Molecular Mechanisms for Regulation of Ubiquitin MetabolismR01GM118491 · NIGMS · VANDERBILT UNIVERSITY · PI MACGURN, JASON A · 2016 to 2020
$1.7M
NCI NIH HHS T32 CA119925NIGMS NIH HHS R01 GM118491
6 · The paper itself

Abstract

Endocytosis is regulated in response to changing environmental conditions to adjust plasma membrane (PM) protein composition for optimal cell growth. Protein networks involved in cargo capture and sorting, membrane sculpting and deformation, and vesicle scission have been well-characterized, but less is known about the networks that sense extracellular cues and relay signals to trigger endocytosis of specific cargo. Hal4 and Hal5 are yeast Snf1-related kinases that were previously reported to regulate nutrient transporter stability by an unknown mechanism. Here we demonstrate that loss of Hal4 and Hal5 activates endocytosis of many different kinds of PM proteins, including Art1-mediated and Art1-independent endocytic events. Acute inhibition of Hal5 in the absence of Hal4 triggers rapid endocytosis, suggesting that Hal kinases function in a nutrient-sensing relay upstream of the endocytic response. Interestingly, Hal5 localizes to the PM, but shifts away from the cell surface in response to stimulation with specific nutrients. We propose that Hal5 functions as a nutrient-responsive regulator of PM protein stability, antagonizing endocytosis and promoting stability of endocytic cargos at the PM in nutrient-limiting conditions.

Indexed as

Biological TransportCell MembraneEndocytosisMembrane ProteinsMembrane Transport ProteinsProtein Interaction MapsProtein KinasesProtein Serine-Threonine KinasesProtein TransportSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsHal5 protein, S cerevisiaeMembrane ProteinsMembrane Transport ProteinsProtein KinasesProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsSAT4 protein, S cerevisiaeSNF1-related protein kinases

Identifiers

PMID32191698
PMCPMC7176151
OpenAlexW3011248743

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.