Evidence map›Paper›PMID 32189223›Full record

ArticleFolia microbiologica2020

Isolation of Bordetella trematum from the respiratory tract of a patient with lung cancer: a case report.

Rudolf Kukla, Michal Svarc, Radka Bolehovska, Lenka Ryskova, Pavla Paterova, Miroslav Fajfr, Lucia Malisova, Helena Zemlickova

Open access · hybridAbstract readCase Reports
In one paragraph

Article in Folia microbiologica, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Detection and Whole-Genome Characteristics ofPathogens (Basel, Switzerland) · 2025
    Article
  3. Article
  4. Access microbiology · 2023
    Article
  5. Detection and Characterization of ClinicalPathogens (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Rudolf KuklaDepartment of Clinical Microbiology, University Hospital Hradec Kralove, Charles University, Faculty of Medicine in Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic. rudolf.kukla@fnhk.cz.ORCID https://orcid.org/0000-0001-7126-9654
Michal SvarcDepartment of Pulmonary Medicine, University Hospital Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.
Radka BolehovskaDepartment of Clinical Microbiology, University Hospital Hradec Kralove, Charles University, Faculty of Medicine in Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.
Lenka RyskovaDepartment of Clinical Microbiology, University Hospital Hradec Kralove, Charles University, Faculty of Medicine in Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.ORCID https://orcid.org/0000-0002-5826-6376
Pavla PaterovaDepartment of Clinical Microbiology, University Hospital Hradec Kralove, Charles University, Faculty of Medicine in Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.ORCID https://orcid.org/0000-0003-0192-7345
Miroslav FajfrDepartment of Clinical Microbiology, University Hospital Hradec Kralove, Charles University, Faculty of Medicine in Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.ORCID https://orcid.org/0000-0002-3561-9482
Lucia MalisovaNational Reference Laboratory for Antibiotics, National Institute of Public Health, Srobarova 48, 100 42, Prague 10, Czech Republic.ORCID https://orcid.org/0000-0002-3737-6656
Helena ZemlickovaDepartment of Clinical Microbiology, University Hospital Hradec Kralove, Charles University, Faculty of Medicine in Hradec Kralove, Sokolska 581, 500 05, Hradec Kralove, Czech Republic.ORCID https://orcid.org/0000-0002-3868-0545
Charles University · CZNational Institute of Public Health · CZUniversity Hospital Hradec Králové · CZ

Funding

Czech Health Research Council, Ministry of Health, Czech Republic 17-28539A
6 · The paper itself

Abstract

We report the case of isolation of Bordetella trematum from the respiratory tract of a patient with lung carcinoma. This gram-negative, opportunistic rod was firstly described in 1996. To date, only several strains of Bordetella trematum have been isolated and reported, mostly from skin and soft tissue infections. The patient was admitted to the ICU of the Pulmonary Department in incipient septic shock with respiratory failure. Intravenous fluid resuscitation and non-invasive ventilation were administered immediately. A broad spectrum antibiotic piperacillin/tazobactam was administered empirically after sampling of material for microbiological examination. The bronchoscopy showed a large cavern of decayed tumour invading into mediastinum. Both sample cultures showed significant quantities of gram-negative non-fermenting bacteria. The isolate was identified using MALDI-TOF MS as Bordetella trematum and the identification was confirmed using 16S ribosomal RNA sequencing. In the last few years, routine bacterial identification using MALDI-TOF MS has enabled correct discrimination of this species. Nevertheless, isolation of Bordetella trematum in clinical samples is still very uncommon, and it is appropriate to confirm the species identification via 16S ribosomal RNA sequencing. To our knowledge, this is the first case of B. trematum isolated from the human respiratory tract since its first description. The clinical significance of Bordetella trematum in the rapid deterioration of the patient's status remains unclear.

Indexed as

AgedAnti-Bacterial AgentsBordetellaBordetella InfectionsFatal OutcomeHumansLung NeoplasmsMaleRespiratory SystemRNA, Ribosomal, 16SSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationAnti-Bacterial AgentsRNA, Ribosomal, 16S16S rRNA sequencingBordetella trematumCase reportMALDI-TOF MSRespiratory tract

Identifiers

PMID32189223
PMCPMC7244602
OpenAlexW3011368717

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.