ArticleThe New phytologist2020
The honeysuckle genome provides insight into the molecular mechanism of carotenoid metabolism underlying dynamic flower coloration.
Article in The New phytologist, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.
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62 citing papers in PubMed, 176 citations in OpenAlex.
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- Carotenoid metabolomic and transcriptomic analyses provide insights into the flower color transition in Lonicera macranthoides.BMC biotechnology · 2025Article
- The chromosome-level genome of Hemerocallis middendorffii provides new insights into the floral scents and color biosynthesis in Chinese native daylily.BMC plant biology · 2025Article
- Integrated transcriptomics and metabolomics analysis of volatiles and variations in carotenoid biosynthesis during different developmental stages of Camellia huana.BMC plant biology · 2025Article
- Metabolomics Combined with Photosynthetic Analysis Reveals Potential Mechanisms of Phenolic Compound Accumulation inInternational journal of molecular sciences · 2025Article
- Expression analysis and functional study of honeysuckle MYB transcription factors under drought stress.Scientific reports · 2025Article
- LoniComp: a platform for gene function comparison and analysis between Lonicera japonica and Lonicera macranthoides.BMC genomics · 2025Article
- Multi-omics analysis reveals ThMYB6 regulation of flavonoid biosynthesis in differently colored tuberous roots ofFrontiers in plant science · 2025Article
- Integrated transcriptomics and metabolomics analysis of flower petals color transition in different phenotype ofFrontiers in plant science · 2025Article
- Molecular Characteristics and Expression Patterns of Carotenoid Cleavage Oxygenase Family Genes in Rice (International journal of molecular sciences · 2024Article
- Unbalanced Expression of Structural Genes in Carotenoid Pathway Contributes to the Flower Color Formation of theInternational journal of molecular sciences · 2024Article
- Haplotype-resolved chromosome-level genome assembly of Ehretia macrophylla.Scientific data · 2024Article
- The chromosome-level genome and functional database accelerate research about biosynthesis of secondary metabolites in Rosa roxburghii.BMC plant biology · 2024Article
2 more citing papers are in PubMed but not listed here.
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Authors and funding
13 authors at 5 institutions in 4 countries.
Funding
Abstract
Lonicera japonica is a widespread member of the Caprifoliaceae (honeysuckle) family utilized in traditional medical practices. This twining vine honeysuckle also is a much-sought ornamental, in part due to its dynamic flower coloration, which changes from white to gold during development. The molecular mechanism underlying dynamic flower coloration in L. japonica was elucidated by integrating whole genome sequencing, transcriptomic analysis and biochemical assays. Here, we report a chromosome-level genome assembly of L. japonica, comprising nine pseudochromosomes with a total size of 843.2 Mb. We also provide evidence for a whole-genome duplication event in the lineage leading to L. japonica, which occurred after its divergence from Dipsacales and Asterales. Moreover, gene expression analysis not only revealed correlated expression of the relevant biosynthetic genes with carotenoid accumulation, but also suggested a role for carotenoid degradation in L. japonica's dynamic flower coloration. The variation of flower color is consistent with not only the observed carotenoid accumulation pattern, but also with the release of volatile apocarotenoids that presumably serve as pollinator attractants. Beyond novel insights into the evolution and dynamics of flower coloration, the high-quality L. japonica genome sequence also provides a foundation for molecular breeding to improve desired characteristics.
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