Evidence map›Paper›PMID 32187531›Full record

ArticleStructure (London, England : 1993)2020

Drosophila OTK Is a Glycosaminoglycan-Binding Protein with High Conformational Flexibility.

Daniel Rozbesky, Jim Monistrol, Vitul Jain, James Hillier, Sergi Padilla-Parra, E Yvonne Jones

Open access · hybridAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 55% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Molecular mechanisms of proteoglycan-mediated semaphorin signaling in axon guidance.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. RHAMM Is a Multifunctional Protein That Regulates Cancer Progression.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Daniel RozbeskyDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK. Electronic address: daniel@strubi.ox.ac.uk.
Jim MonistrolDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK.
Vitul JainDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK.
James HillierDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK.
Sergi Padilla-ParraDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK; Cellular imaging, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK; Department of Infectious Diseases, King's College London, Faculty of Life Sciences & Medicine, London SE1 9RT, UK; Randall Centre for Cell and Molecular Biology, King's College London, London SE1 1UL, UK.
E Yvonne JonesDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK. Electronic address: yvonne@strubi.ox.ac.uk.
Centre for Human Genetics · GB

Funding

Cancer Research UK 17721Medical Research Council MR/M000141/1Medical Research Council MR/T000503/1Wellcome Trust
6 · The paper itself

Abstract

The transmembrane protein OTK plays an essential role in plexin and Wnt signaling during Drosophila development. We have determined a crystal structure of the last three domains of the OTK ectodomain and found that OTK shows high conformational flexibility resulting from mobility at the interdomain interfaces. We failed to detect direct binding between Drosophila Plexin A (PlexA) and OTK, which was suggested previously. We found that, instead of PlexA, OTK directly binds semaphorin 1a. Our binding analyses further revealed that glycosaminoglycans, heparin and heparan sulfate, are ligands for OTK and thus may play a role in the Sema1a-PlexA axon guidance system.

Indexed as

AnimalsCell MembraneChlorocebus aethiopsCHO CellsCOS CellsCricetulusCrystallography, X-RayDrosophila ProteinsFluorescence Resonance Energy TransferGlycosaminoglycansHEK293 CellsHeparan SulfateHeparinHumansNerve Tissue ProteinsProtein ConformationDrosophila ProteinsGlycosaminoglycansHeparan SulfateHeparinNerve Tissue ProteinsOtk protein, DrosophilaplexA protein, DrosophilaReceptor Protein-Tyrosine KinasesReceptors, Cell Surfacesemaphorin 1a, DrosophilaSemaphorinsGAGglycosaminoglycansIg-like domainOff-trackOTKPlexAplexinSema1asignalingWnt

Identifiers

PMID32187531
PMCPMC7203548
OpenAlexW3011376598

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.