Evidence map›Paper›PMID 32184449›Full record

ArticleScientific reports2020

Genome-wide transcriptome profile of rice hybrids with and without Oryza rufipogon introgression reveals candidate genes for yield.

Haritha Guttikonda, Shashi Rekha Thummala, Surekha Agarwal, Satendra K Mangrauthia, Rajeshwari Ramanan, Sarla Neelamraju

Open access · goldAbstract readComparative Study
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Whole-Genome Sequencing of KMR3 andFrontiers in plant science · 2022
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Haritha GuttikondaICAR-Indian Institute of Rice Research, Hyderabad, 500 030, India.
Shashi Rekha ThummalaCSIR-Centre for Cellular and Molecular Biology, Hyderabad, 500 007, India.
Surekha AgarwalICAR-Indian Institute of Rice Research, Hyderabad, 500 030, India.
Satendra K MangrauthiaICAR-Indian Institute of Rice Research, Hyderabad, 500 030, India. skmdrr@gmail.com.
Rajeshwari RamananCSIR-Centre for Cellular and Molecular Biology, Hyderabad, 500 007, India.
Sarla NeelamrajuICAR-Indian Institute of Rice Research, Hyderabad, 500 030, India. sarla_neelamraju@yahoo.com.
Indian Institute of Rice Research · INCentre for Cellular and Molecular Biology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we compared genome-wide transcriptome profile of two rice hybrids, one with (test hybrid IR79156A/IL50-13) and the other without (control hybrid IR79156A/KMR3) O. rufipogon introgressions to identify candidate genes related to grain yield in the test hybrid. IL50-13 (Chinsurah Nona2 IET21943) the male parent (restorer) used in the test hybrid, is an elite BC

Indexed as

Quantitative Trait LociEdible GrainExome SequencingGene Expression ProfilingGene Expression Regulation, PlantGene Regulatory NetworksGenetic IntrogressionGenetic VariationOryzaPlant BreedingPlant LeavesPlant ProteinsPlant Proteins

Identifiers

PMID32184449
PMCPMC7078188
OpenAlexW3012074943

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.