Evidence map›Paper›PMID 32184287›Full record

ArticleScience signaling2020

PTPN22 phosphorylation acts as a molecular rheostat for the inhibition of TCR signaling.

Shen Yang, Mattias N D Svensson, Nathaniel H O Harder, Wan-Chen Hsieh, Eugenio Santelli, William B Kiosses, James J Moresco, John R Yates, Charles C King, Lin Liu and 2 more

Open access · greenAbstract read
In one paragraph

Article in Science signaling, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Influence ofFrontiers in immunology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Shen YangDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093, USA.ORCID 0000-0002-4983-6787
Mattias N D SvenssonDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093, USA.ORCID 0000-0001-8077-9824
Nathaniel H O HarderDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093, USA.ORCID 0000-0002-5498-3570
Wan-Chen HsiehDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093, USA.
Eugenio SantelliDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093, USA.ORCID 0000-0002-8739-2750
William B KiossesCore Microscopy, La Jolla Institute for Immunology, La Jolla, CA 92037, USA.ORCID 0000-0003-1832-9050
James J MorescoDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.ORCID 0000-0003-1178-1642
John R YatesDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.ORCID 0000-0001-5267-1672
Charles C KingDepartment of Pediatrics, University of California, San Diego, La Jolla, CA 92093, USA.
Lin LiuDepartment of Family Medicine and Public Health, University of California, San Diego, La Jolla, CA, 92037, USA.
Stephanie M StanfordDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093, USA.
Nunzio BottiniDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093, USA. nbottini@health.ucsd.edu.ORCID 0000-0001-9025-7501
University of California San Diego · USLa Jolla Institute for Immunology · USScripps Research Institute · US

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI YATES III, JOHN R · 2012 to 2021
$20.7M
PTPN22 AND AUTOIMMUNITYR01AI070544 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BOTTINI, NUNZIO · 2008 to 2019
$4.0M
Super-resolution confocal microscopeS10OD021831 · OD · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI LEY, KLAUS F. · 2017 to 2017
$566k
NIAID NIH HHS R01 AI070544NIGMS NIH HHS P41 GM103533NIH HHS S10 OD021831
6 · The paper itself

Abstract

The hematopoietic-specific protein tyrosine phosphatase nonreceptor type 22 (PTPN22) is encoded by a major autoimmunity risk gene. PTPN22 inhibits T cell activation by dephosphorylating substrates involved in proximal T cell receptor (TCR) signaling. Here, we found by mass spectrometry that PTPN22 was phosphorylated at Ser

Indexed as

Signal TransductionAutoimmune DiseasesCells, CulturedCSK Tyrosine-Protein KinaseHEK293 CellsHumansJurkat CellsMass SpectrometryMutation, MissensePhosphorylationProtein Tyrosine Phosphatase, Non-Receptor Type 22Receptors, Antigen, T-CellSerineT-LymphocytesCSK Tyrosine-Protein KinaseProtein Tyrosine Phosphatase, Non-Receptor Type 22Receptors, Antigen, T-CellSerine

Identifiers

PMID32184287
PMCPMC7263369
OpenAlexW3011846521

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.