Evidence map›Paper›PMID 32183000›Full record

ArticleCells2020

A 3D Cell Death Assay to Quantitatively Determine Ferroptosis in Spheroids.

Robin Demuynck, Iuliia Efimova, Abraham Lin, Heidi Declercq, Dmitri V Krysko

Open access · goldAbstract read
In one paragraph

Article in Cells, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Cell viability imaging in tumor spheroidsChemical communications (Cambridge, England) · 2024
    Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. The three-dimension preclinical models for ferroptosis monitoring.Frontiers in bioengineering and biotechnology · 2022
    Review
  10. Review
  11. Immunogenic ferroptosis and where to find it?Journal for immunotherapy of cancer · 2021
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Robin DemuynckCell Death Investigation and Therapy Laboratory, Department of Human Structure and Repair, Ghent University, 9000 Ghent, Belgium.ORCID 0000-0001-7930-8347
Iuliia EfimovaCell Death Investigation and Therapy Laboratory, Department of Human Structure and Repair, Ghent University, 9000 Ghent, Belgium.
Abraham LinPlasma, Laser Ablation and Surface Modelling Group, University of Antwerp, 2610 Wilrijk, Belgium.ORCID 0000-0003-0097-3323
Heidi DeclercqTissue Engineering and Biomaterials Group, Department of Human Structure and Repair, Ghent University, 9000 Ghent, Belgium.
Dmitri V KryskoCell Death Investigation and Therapy Laboratory, Department of Human Structure and Repair, Ghent University, 9000 Ghent, Belgium.ORCID 0000-0002-9692-2047
Ghent University · BESechenov University · RUUniversity of Antwerp · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The failure of drug efficacy in clinical trials remains a big issue in cancer research. This is largely due to the limitations of two-dimensional (2D) cell cultures, the most used tool in drug screening. Nowadays, three-dimensional (3D) cultures, including spheroids, are acknowledged to be a better model of the in vivo environment, but detailed cell death assays for 3D cultures (including those for ferroptosis) are scarce. In this work, we show that a new cell death analysis method, named 3D Cell Death Assay (3DELTA), can efficiently determine different cell death types including ferroptosis and quantitatively assess cell death in tumour spheroids. Our method uses Sytox dyes as a cell death marker and Triton X-100, which efficiently permeabilizes all cells in spheroids, was used to establish 100% cell death. After optimization of Sytox concentration, Triton X-100 concentration and timing, we showed that the 3DELTA method was able to detect signals from all cells without the need to disaggregate spheroids. Moreover, in this work we demonstrated that 2D experiments cannot be extrapolated to 3D cultures as 3D cultures are less sensitive to cell death induction. In conclusion, 3DELTA is a more cost-effective way to identify and measure cell death type in 3D cultures, including spheroids.

Indexed as

Cell DeathAnimalsCell CountCell Culture TechniquesCell Line, TumorDrug Evaluation, PreclinicalFerroptosisFluorescenceFluorescent DyesHumansMiceSpheroids, CellularFluorescent Dyes3D culturescancercell death assayferroptosisspheroids

Identifiers

PMID32183000
PMCPMC7140689
OpenAlexW3011781933

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.