Evidence map›Paper›PMID 32182356›Full record

ArticleNucleic acids research2020

YBEY is an essential biogenesis factor for mitochondrial ribosomes.

Sabrina Summer, Anna Smirnova, Alessandro Gabriele, Ursula Toth, Akinyemi Mandela Fasemore, Konrad U Förstner, Lauriane Kuhn, Johana Chicher, Philippe Hammann, Goran Mitulović and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. A roadmap for ribosome assembly in human mitochondria.Nature structural & molecular biology · 2024
    Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Mitoribosome Biogenesis.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  10. GTPase Era at the heart of ribosome assembly.Frontiers in molecular biosciences · 2023
    Review
  11. How RNases Shape Mitochondrial Transcriptomes.International journal of molecular sciences · 2022
    Review
  12. Article
  13. Article
  14. Article
  15. Oxidative Stress Response inPathogens (Basel, Switzerland) · 2021
    Review
  16. Article
  17. Article
  18. Human Mitoribosome Biogenesis and Its Emerging Links to Disease.International journal of molecular sciences · 2021
    Review
  19. The Diseased Mitoribosome.FEBS letters · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Sabrina SummerCenter for Anatomy & Cell Biology, Medical University of Vienna, Vienna A-1090, Austria.
Anna SmirnovaUMR7156 - Molecular Genetics, Genomics, Microbiology, University of Strasbourg, CNRS, Strasbourg F-67000, France.
Alessandro GabrieleUMR7156 - Molecular Genetics, Genomics, Microbiology, University of Strasbourg, CNRS, Strasbourg F-67000, France.
Ursula TothCenter for Anatomy & Cell Biology, Medical University of Vienna, Vienna A-1090, Austria.
Akinyemi Mandela FasemoreInstitute for Molecular Infection Biology, University of Würzburg, Würzburg 97080, Germany.
Konrad U FörstnerInstitute for Molecular Infection Biology, University of Würzburg, Würzburg 97080, Germany.
Lauriane KuhnProteomics Platform Strasbourg-Esplanade, FRC1589, IBMC, CNRS, Strasbourg F-67000, France.
Johana ChicherProteomics Platform Strasbourg-Esplanade, FRC1589, IBMC, CNRS, Strasbourg F-67000, France.
Philippe HammannProteomics Platform Strasbourg-Esplanade, FRC1589, IBMC, CNRS, Strasbourg F-67000, France.
Goran MitulovićProteomics Core Facility, Clinical Department for Laboratory Medicine, Medical University of Vienna, Vienna A-1090, Austria.
Nina EntelisUMR7156 - Molecular Genetics, Genomics, Microbiology, University of Strasbourg, CNRS, Strasbourg F-67000, France.
Ivan TarassovUMR7156 - Molecular Genetics, Genomics, Microbiology, University of Strasbourg, CNRS, Strasbourg F-67000, France.
Walter RossmanithCenter for Anatomy & Cell Biology, Medical University of Vienna, Vienna A-1090, Austria.
Alexandre SmirnovUMR7156 - Molecular Genetics, Genomics, Microbiology, University of Strasbourg, CNRS, Strasbourg F-67000, France.
Centre National de la Recherche Scientifique · FRMedical University of Vienna · ATTH Köln - University of Applied Sciences · DEUniversity of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribosome biogenesis requires numerous trans-acting factors, some of which are deeply conserved. In Bacteria, the endoribonuclease YbeY is believed to be involved in 16S rRNA 3'-end processing and its loss was associated with ribosomal abnormalities. In Eukarya, YBEY appears to generally localize to mitochondria (or chloroplasts). Here we show that the deletion of human YBEY results in a severe respiratory deficiency and morphologically abnormal mitochondria as an apparent consequence of impaired mitochondrial translation. Reduced stability of 12S rRNA and the deficiency of several proteins of the small ribosomal subunit in YBEY knockout cells pointed towards a defect in mitochondrial ribosome biogenesis. The specific interaction of mitoribosomal protein uS11m with YBEY suggests that the latter helps to properly incorporate uS11m into the nascent small subunit in its late assembly stage. This scenario shows similarities with final stages of cytosolic ribosome biogenesis, and may represent a late checkpoint before the mitoribosome engages in translation.

Indexed as

Cell RespirationEscherichia coliGene ExpressionHEK293 CellsHumansMitochondriaMitochondrial ProteinsMitochondrial RibosomesRibonucleasesRibosomal ProteinsRNA, RibosomalMitochondrial ProteinsMRPS11 protein, humanRibonucleasesRibosomal ProteinsRNA, RibosomalRNA, ribosomal, 12SYBEY protein, human

Identifiers

PMID32182356
PMCPMC7515705
OpenAlexW3010864969

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.