Evidence map›Paper›PMID 32182273›Full record

ArticlePloS one2020

Identification, molecular characterization and expression of JAZ genes in Lycoris aurea.

Peng Wang, Shuojun Yu, Xiaokang Han, Junya Xu, Qingyuan He, Sheng Xu, Ren Wang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 34 citations in OpenAlex.

  1. Genome-Wide Identification of thePlants (Basel, Switzerland) · 2026
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  10. Transcriptome-Wide Identification and Characterization of theInternational journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Peng WangInstitute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China.
Shuojun YuCollege of Life and Health Science, Anhui Science and Technology University, Fengyang, China.
Xiaokang HanState Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
Junya XuInstitute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China.
Qingyuan HeCollege of Life and Health Science, Anhui Science and Technology University, Fengyang, China.
Sheng XuInstitute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China.
Ren WangInstitute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China.ORCID 0000-0001-6724-0744
Chinese Academy of Sciences · CNAnhui University of Science and Technology · CNFudan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Jasmonates (JAs) are key phytohormones involved in regulation of plant growth and development, stress responses, and secondary metabolism. It has been reported that treatments with JAs could increase the contents of Amaryllidaceae alkaloids in Amaryllidaceae plants. Jasmonate ZIM (zinc-finger inflorescence meristem) domain (JAZ) proteins are key components in JA signal processes. However, JAZ proteins have not been characterized in genus Lycoris. In this study, we identified and cloned seven differentially expressed JAZ genes (namely LaJAZ1-LaJAZ7) from Lycoris aurea. Bioinformatic analyses revealed that these seven LaJAZ proteins contain the ZIM domain and JA-associated (Jas, also named CCT_2) motif. Quantitative reverse transcription polymerase chain reaction (qRT-PCR) analysis revealed that these LaJAZ genes display different expression patterns in L. aurea tissues, and most of them are inducible when treated with methyl jasmonate (MeJA) treatment. Subcellular localization assay demonstrated that LaJAZ proteins are localized in the cell nucleus or cytoplasm. In addition, LaJAZ proteins could interact with each other to form homodimer and/or heterodimer. The findings in this study may facilitate further functional research of the LaJAZ genes, especially the potential regulatory mechanism of plant secondary metabolites including Amaryllidaceae alkaloids in L. aurea.

Indexed as

AcetatesCell NucleusComputational BiologyCyclopentanesCytoplasmGene Expression Regulation, PlantLycorisOxylipinsPlant Growth RegulatorsPlant ProteinsProtein DomainsZinc FingersAcetatesCyclopentanesjasmonic acidmethyl jasmonateOxylipinsPlant Growth RegulatorsPlant Proteins

Identifiers

PMID32182273
PMCPMC7077819
OpenAlexW3012045286

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.