ArticleJournal of computational biology : a journal of computational molecular cell biology2020
Efficient Construction of a Complete Index for Pan-Genomics Read Alignment.
Article in Journal of computational biology : a journal of computational molecular cell biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
39 citing papers in PubMed.
- Movi 2: fast and space-efficient queries on pangenomes.Bioinformatics (Oxford, England) · 2026Article
- Building genomic data structures from compressed representations using prefix-free parsing.Genome research · 2026Review
- Minimizing reference bias with an imputed personalized reference.Genome research · 2026Article
- MBGC2: Boosting compression via efficient encoding of approximate matches in genome collections.GigaScience · 2026Article
- Col-BWT: Pangenomic Seed Chaining with Maximal Matches Improves Read Classification.Journal of computational biology : a journal of computational molecular cell biology · 2026Article
- Suffixient Arrays: A New Efficient Suffix Array Compression Technique.Theory of computing systems · 2026Article
- Movi 2: Fast and Space-Efficient Queries on Pangenomes.bioRxiv : the preprint server for biology · 2025Article
- Accurate short-read alignment throughGenome research · 2025Article
- Mumemto: efficient maximal matching across pangenomes.Genome biology · 2025Article
- Improved pangenomic classification accuracy with chain statistics.bioRxiv : the preprint server for biology · 2024Article
- Cluster-efficient pangenome graph construction with nf-core/pangenome.Bioinformatics (Oxford, England) · 2024Article
- Article
- A survey of BWT variants for string collections.Bioinformatics (Oxford, England) · 2024Article
- Measuring, visualizing, and diagnosing reference bias with biastools.Genome biology · 2024Article
- Suffix sorting via matching statistics.Algorithms for molecular biology : AMB · 2024Article
- Measuring, visualizing and diagnosing reference bias with biastools.bioRxiv : the preprint server for biology · 2024Article
- Identification of Splice Variants and Isoforms in Transcriptomics and Proteomics.Annual review of biomedical data science · 2023Review
- Efficient taxa identification using a pangenome index.Genome research · 2023Article
- SPUMONI 2: improved classification using a pangenome index of minimizer digests.Genome biology · 2023Article
- Pangenomic genotyping with the marker array.Algorithms for molecular biology : AMB · 2023Article
Corrections and comments
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Authors and funding
6 authors.
Funding
Abstract
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.