Evidence map›Paper›PMID 32179899›Full record

ArticleFEMS microbiology ecology2020

Soil microbial diversity in adjacent forest systems - contrasting native, old growth kauri (Agathis australis) forest with exotic pine (Pinus radiata) plantation forest.

Alexa-Kate Byers, Leo Condron, Tom Donavan, Maureen O'Callaghan, Taoho Patuawa, Nick Waipara, Amanda Black

Abstract read
In one paragraph

Article in FEMS microbiology ecology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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  6. Chromosome-level assembly of theFrontiers in microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alexa-Kate ByersBio-Protection Research Centre, Lincoln University, P.O. Box 85084, Lincoln 7674, New Zealand.
Leo CondronFaculty of Agriculture and Life Sciences, Lincoln University, P.O. Box 85084, Lincoln 7674, New Zealand.
Tom DonavanTe Roroa Group, P.O. Box 6, Waimamaku 0446, New Zealand.
Maureen O'CallaghanAgResearch Limited, 1365 Springs Road, Lincoln 7674, New Zealand.
Taoho PatuawaTe Roroa Group, P.O. Box 6, Waimamaku 0446, New Zealand.
Nick WaiparaInstitute of Plant and Food Research, Sandringham, Auckland 1025, New Zealand.
Amanda BlackBio-Protection Research Centre, Lincoln University, P.O. Box 85084, Lincoln 7674, New Zealand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Globally, the conversion of primary forests to plantations and agricultural landscapes is a common land use change. Kauri (Agathis australis) is one of the most heavily impacted indigenous tree species of New Zealand with <1% of primary forest remaining as fragments adjacent to pastoral farming and exotic forest plantations. By contrasting two forest systems, we investigated if the fragmentation of kauri forests and introduction of pine plantations (Pinus radiata) are significantly impacting the diversity and composition of soil microbial communities across Waipoua kauri forest, New Zealand. Using next generation based 16S rRNA and ITS gene region sequencing, we identified that fungal and bacterial community composition significantly differed between kauri and pine forest soils. However, fungal communities displayed the largest differences in diversity and composition. This research revealed significant shifts in the soil microbial communities surrounding remnant kauri fragments, including the loss of microbial taxa with functions in disease suppression and plant health. Kauri dieback disease, caused by Phytophthora agathidicida, currently threatens the kauri forest ecosystem. Results from this research highlight the need for further investigations into how changes to soil microbial diversity surrounding remnant kauri fragments impact tree health and disease expression.

Indexed as

PinusEcosystemForestsNew ZealandRNA, Ribosomal, 16SSoilSoil MicrobiologyRNA, Ribosomal, 16SSoilforest fragmentationkauri (Agathis australis)kauri dieback diseasepine (Pinus radiata)soil microbial ecology

Identifiers

PMID32179899
PMCPMC7161737

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.