Evidence map›Paper›PMID 32179834›Full record

ArticleScientific reports2020

Transcriptomic identification of miR-205 target genes potentially involved in metastasis and survival of cutaneous malignant melanoma.

Beatriz Sánchez-Sendra, Eva Serna, Lara Navarro, Jose F González-Muñoz, Jesica Portero, Alberto Ramos, Amelia Murgui, Carlos Monteagudo

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Beatriz Sánchez-SendraDepartment of Pathology, Universitat de València, València, Spain.ORCID http://orcid.org/0000-0002-9115-9249
Eva SernaUnidad Central de Investigación en Medicina, Facultad de Medicina, Universitat de València, València, Spain.
Lara NavarroDepartment of Pathology, Universitat de València, València, Spain.
Jose F González-MuñozBiomedical Research Institute INCLIVA, València, Spain.ORCID http://orcid.org/0000-0002-9832-3355
Jesica PorteroUnidad Central de Investigación en Medicina, Facultad de Medicina, Universitat de València, València, Spain.
Alberto RamosBiomedical Research Institute INCLIVA, València, Spain.
Amelia MurguiDepartment of Biochemistry and Molecular Biology, Universitat de València, València, Spain.
Carlos MonteagudoDepartment of Pathology, Universitat de València, València, Spain. carlos.monteagudo@uv.es.
Universitat de València · ESINCLIVA Health Research Institute · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cutaneous melanoma is an aggressive neoplasm and is responsible for the majority of skin cancer deaths. Several miRNAs are involved in melanoma tumor progression. One of them is miR-205, the loss of which contributes to the development of melanoma metastasis. We evaluated whole-genome mRNA expression profiling associated with different miR-205 expression levels in melanoma cells. Differential expression analysis identified 243 differentially expressed transcripts including inositol polyphosphate 5'-phosphatase-like protein-1 (INPPL1) and BTB/POZ Domain-Containing Protein 3 (BTBD3). INPPL1 and BTBD3 were downregulated when melanoma cells expressed miR-205, indicating that these genes are potential miR-205 targets. Additionally, the target prediction algorithm TargetScan revealed that INPPL1 and BTBD3 genes had predicted target sites of miR-205 in their 3'UTRs and functional analysis demonstrated that these genes were directly linked to miR-205. Interestingly, our clinical data showed that INPPL1 was significantly associated with lymph node metastasis-free survival (LNMFS), distant metastasis-free survival (DMFS) and melanoma specific survival (MSS). This study supports INPPL1 as a miR-205 target gene and, therefore, that the involvement of miR-205 in the metastatic dissemination of malignant melanoma is, at least in part, via INPPL1.

Indexed as

3' Untranslated RegionsDisease-Free SurvivalDown-RegulationGene Expression ProfilingGene Expression Regulation, NeoplasticHumansLymphatic MetastasisMelanomaMicroRNAsNeoplasm MetastasisNerve Tissue ProteinsPhosphatidylinositol-3,4,5-Trisphosphate 5-PhosphatasesSkin NeoplasmsTranscriptomeTumor Cells, Cultured3' Untranslated RegionsBTBD3 protein, humanINPPL1 protein, humanMicroRNAsMIR205, humanNerve Tissue ProteinsPhosphatidylinositol-3,4,5-Trisphosphate 5-Phosphatases

Identifiers

PMID32179834
PMCPMC7075905
OpenAlexW3011809596

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.