Evidence map›Paper›PMID 32179751›Full record

ArticleNature communications2020

Dissecting the early steps of MLL induced leukaemogenic transformation using a mouse model of AML.

Silvia Basilico, Xiaonan Wang, Alison Kennedy, Konstantinos Tzelepis, George Giotopoulos, Sarah J Kinston, Pedro M Quiros, Kim Wong, David J Adams, Larissa S Carnevalli and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 59 citations in OpenAlex.

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  9. A rapid CRISPR competitive assay forComputational and structural biotechnology journal · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Silvia Basilico *Wellcome and MRC Cambridge Stem Cell Institute and University of Cambridge Department of Haematology, Jeffrey Cheah Biomedical Centre, Puddicombe Way, Cambridge, CB2 0AW, UK.
Xiaonan Wang *Wellcome and MRC Cambridge Stem Cell Institute and University of Cambridge Department of Haematology, Jeffrey Cheah Biomedical Centre, Puddicombe Way, Cambridge, CB2 0AW, UK.ORCID http://orcid.org/0000-0003-3759-778X
Alison KennedyWellcome and MRC Cambridge Stem Cell Institute and University of Cambridge Department of Haematology, Jeffrey Cheah Biomedical Centre, Puddicombe Way, Cambridge, CB2 0AW, UK.ORCID http://orcid.org/0000-0001-6681-3256
Konstantinos TzelepisWellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK.ORCID http://orcid.org/0000-0002-4865-7648
George GiotopoulosWellcome and MRC Cambridge Stem Cell Institute and University of Cambridge Department of Haematology, Jeffrey Cheah Biomedical Centre, Puddicombe Way, Cambridge, CB2 0AW, UK.ORCID http://orcid.org/0000-0003-1390-6592
Sarah J KinstonWellcome and MRC Cambridge Stem Cell Institute and University of Cambridge Department of Haematology, Jeffrey Cheah Biomedical Centre, Puddicombe Way, Cambridge, CB2 0AW, UK.
Pedro M QuirosWellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK.ORCID http://orcid.org/0000-0002-7793-6291
Kim WongWellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK.ORCID http://orcid.org/0000-0002-0984-1477
David J AdamsWellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK.ORCID http://orcid.org/0000-0001-9490-0306
Larissa S CarnevalliOncology, AstraZeneca, 1 Francis Crick Avenue, Cambridge, CB2 0AA, UK.ORCID http://orcid.org/0000-0001-7432-0195
Brian J P HuntlyWellcome and MRC Cambridge Stem Cell Institute and University of Cambridge Department of Haematology, Jeffrey Cheah Biomedical Centre, Puddicombe Way, Cambridge, CB2 0AW, UK.ORCID http://orcid.org/0000-0003-0312-161X
George S VassiliouWellcome and MRC Cambridge Stem Cell Institute and University of Cambridge Department of Haematology, Jeffrey Cheah Biomedical Centre, Puddicombe Way, Cambridge, CB2 0AW, UK.ORCID http://orcid.org/0000-0003-4337-8022
Fernando J Calero-NietoWellcome and MRC Cambridge Stem Cell Institute and University of Cambridge Department of Haematology, Jeffrey Cheah Biomedical Centre, Puddicombe Way, Cambridge, CB2 0AW, UK. fjc28@cam.ac.uk.ORCID http://orcid.org/0000-0003-3358-8253
Berthold GöttgensWellcome and MRC Cambridge Stem Cell Institute and University of Cambridge Department of Haematology, Jeffrey Cheah Biomedical Centre, Puddicombe Way, Cambridge, CB2 0AW, UK. bg200@cam.ac.uk.ORCID http://orcid.org/0000-0001-6302-5705
Wellcome/MRC Cambridge Stem Cell Institute · GBWellcome Sanger Institute · GBAstraZeneca (United Kingdom) · GB

Funding

VISION: ValIdated Systematic IntegratiON of epigenomic dataR24DK106766 · NIDDK · PENNSYLVANIA STATE UNIVERSITY, THE · PI BLOBEL, GERD A, BODINE, DAVID M. · 2016 to 2020
$6.2M
Cancer Research UK 21762Cancer Research UK 25508Medical Research Council MC_PC_12009Medical Research Council MR/M008975/1NIDDK NIH HHS R24 DK106766Wellcome Trust 206328/Z/17/ZWellcome Trust 210926/Z/18/Z
6 · The paper itself

Abstract

Leukaemogenic mutations commonly disrupt cellular differentiation and/or enhance proliferation, thus perturbing the regulatory programs that control self-renewal and differentiation of stem and progenitor cells. Translocations involving the Mll1 (Kmt2a) gene generate powerful oncogenic fusion proteins, predominantly affecting infant and paediatric AML and ALL patients. The early stages of leukaemogenic transformation are typically inaccessible from human patients and conventional mouse models. Here, we take advantage of cells conditionally blocked at the multipotent haematopoietic progenitor stage to develop a MLL-r model capturing early cellular and molecular consequences of MLL-ENL expression based on a clear clonal relationship between parental and leukaemic cells. Through a combination of scRNA-seq, ATAC-seq and genome-scale CRISPR-Cas9 screening, we identify pathways and genes likely to drive the early phases of leukaemogenesis. Finally, we demonstrate the broad utility of using matched parental and transformed cells for small molecule inhibitor studies by validating both previously known and other potential therapeutic targets.

Indexed as

Cell Transformation, NeoplasticAnimalsDisease Models, AnimalDNA-Binding ProteinsFemaleHematopoietic Stem CellsHistone-Lysine N-MethyltransferaseHomeodomain ProteinsHumansLeukemia, Myeloid, AcuteMiceMice, Inbred C57BLMyeloid-Lymphoid Leukemia ProteinOncogene Proteins, FusionTranscription FactorsDNA-Binding ProteinsHistone-Lysine N-MethyltransferaseHomeodomain ProteinsHoxb8 protein, mouseKmt2a protein, mouseMllt1 protein, mouseMyeloid-Lymphoid Leukemia ProteinOncogene Proteins, FusionTranscription Factors

Identifiers

PMID32179751
PMCPMC7075888
OpenAlexW2938419368

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.