Evidence map›Paper›PMID 32179732›Full record

ArticleNature communications2020

Chiral twisting in a bacterial cytoskeletal polymer affects filament size and orientation.

Handuo Shi, David A Quint, Gregory M Grason, Ajay Gopinathan, Kerwyn Casey Huang

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Sensing the shape of a surface by tightly surface-bound filaments.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Molecular biology of the cell · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Feedback linking cell envelope stiffness, curvature, and synthesis enables robust rod-shaped bacterial growth.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Molecular Dynamics Simulations of Curved Lipid Membranes.International journal of molecular sciences · 2022
    Review
  14. Article
  15. Bending-torsional elasticity and energetics of the plus-end microtubule tip.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Article
  17. Article
  18. Microorganisms · 2021
    Review
  19. Control of septum thickness by the curvature of SepF polymers.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Handuo ShiDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
David A QuintDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Gregory M GrasonDepartment of Polymer Science and Engineering, University of Massachusetts, Amherst, MA, 01003, USA.
Ajay GopinathanDepartment of Physics, University of California at Merced, Merced, CA, 95343, USA.
Kerwyn Casey HuangDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA. kchuang@stanford.edu.ORCID http://orcid.org/0000-0002-8043-8138
University of California, Merced · USChan Zuckerberg Initiative (United States) · USStanford University · USUniversity of Massachusetts Amherst · US

Funding

Breakthrough Molecular Dynamics Research via an Anton2 SupercomputerR01GM116961 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI BLOOD, PHILIP D. · 2016 to 2023
$3.0M
Engineering of cell shape and intracellular organizationDP2OD006466 · OD · STANFORD UNIVERSITY · PI HUANG, KERWYN C. · 2009 to 2009
$2.4M
NIGMS NIH HHS R01 GM116961NIH HHS DP2 OD006466
6 · The paper itself

Abstract

In many rod-shaped bacteria, the actin homolog MreB directs cell-wall insertion and maintains cell shape, but it remains unclear how structural changes to MreB affect its organization in vivo. Here, we perform molecular dynamics simulations for Caulobacter crescentus MreB to extract mechanical parameters for inputs into a coarse-grained biophysical polymer model that successfully predicts MreB filament properties in vivo. Our analyses indicate that MreB double protofilaments can exhibit left-handed twisting that is dependent on the bound nucleotide and membrane binding; the degree of twisting correlates with the length and orientation of MreB filaments observed in vitro and in vivo. Our molecular dynamics simulations also suggest that membrane binding of MreB double protofilaments induces a stable membrane curvature of similar magnitude to that observed in vivo. Thus, our multiscale modeling correlates cytoskeletal filament size with conformational changes inferred from molecular dynamics simulations, providing a paradigm for connecting protein filament structure and mechanics to cellular organization and function.

Indexed as

Bacterial ProteinsBiomechanical PhenomenaCaulobacter crescentusCytoskeletonMolecular Dynamics SimulationPolymersRotationBacterial ProteinsPolymers

Identifiers

PMID32179732
PMCPMC7075873
OpenAlexW3011291274

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.