Evidence map›Paper›PMID 32179704›Full record

ArticleJournal of medical genetics2020

Variable expression of subclinical phenotypes instead of reduced penetrance in families with mild triphalangeal thumb phenotypes.

Jacob W P Potuijt, Jeannette Hoogeboom, Esther de Graaff, Christianne A van Nieuwenhoven, Robert Jan H Galjaard

Open access · hybridAbstract read
In one paragraph

Article in Journal of medical genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Surgical Reconstruction for the Triphalangeal Thumb.Plastic and reconstructive surgery. Global open · 2023
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jacob W P PotuijtPlastic, Reconstructive and Hand Surgery, Erasmus MC, University Medical Center Rotterdam, Rotterdam, The Netherlands j.potuijt@erasmusmc.nl.ORCID 0000-0003-4893-3064
Jeannette HoogeboomClinical Genetics, Erasmus MC, University Medical Center, Rotterdam, The Netherlands.
Esther de GraaffDivision of Cell Biology, Neurobiology and Biophysics, Utrecht University, Utrecht, Utrecht, The Netherlands.
Christianne A van NieuwenhovenPlastic, Reconstructive and Hand Surgery, Erasmus MC, University Medical Centre Rotterdam, Rotterdam, The Netherlands.
Robert Jan H GaljaardClinical Genetics, Erasmus MC, University Medical Center, Rotterdam, The Netherlands.
Erasmus MC · NLUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe of zone of polarizing activity regulatory sequence (ZRS) is a regulatory element residing in intron 5 of LMBR1 and regulates Sonic Hedgehog expression in the limb bud. Variants in the ZRS are generally fully penetrant and can cause triphalangeal thumb (TPT) and polydactyly in affected families.

objectiveIn this report, we describe two families with mild phenotypical presentation.

methodsWe performed a field study for clinical evaluation and sequenced the ZRS for variantsusing Sanger sequencing.

resultsIn family I, a novel 165A>G variant in the ZRS (g.156584405A>G, GRCh37/Hg19) was found. In family II, we identified a 295T>C variant in the ZRS (g.156584535T>C, GRCh37/Hg19). Family members of both families who were presumed to be unaffected shared the variant in the ZRS with affected family members, suggesting reduced penetrance of the genotype. However, clinical examination of these unaffected family members revealed minor anomalies like broad thumbs and lack of thumb opposition. As the phenotype in affected patients is remarkably mild, we suggest that these ZRS variants are minimally disruptive for Sonic Hedgehog expression and therefore can result in subclinical phenotypes.

conclusionOur study underlines the importance of accurate clinical examination and appropriate genetic counselling in families with mild cases of TPT.

Indexed as

Congenital AbnormalitiesEnhancer Elements, GeneticFemaleGene Expression RegulationHand Deformities, CongenitalHedgehog ProteinsHumansMaleMembrane ProteinsPedigreePenetrancePolydactylyRegulatory Elements, TranscriptionalThumbHedgehog ProteinsLMBR1 protein, humanMembrane Proteinscongenital abnormalitiesgenetic enhancer elementspolydactyly

Identifiers

PMID32179704
PMCPMC7525795
OpenAlexW3011840209

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.