Evidence map›Paper›PMID 32176702›Full record

ArticlePLoS genetics2020

Reciprocal c-di-GMP signaling: Incomplete flagellum biogenesis triggers c-di-GMP signaling pathways that promote biofilm formation.

Daniel C Wu, David Zamorano-Sánchez, Fernando A Pagliai, Jin Hwan Park, Kyle A Floyd, Calvin K Lee, Giordan Kitts, Christopher B Rose, Eric M Bilotta, Gerard C L Wong and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 69 citations in OpenAlex.

  1. Structural basis of multimodal adsorption and infection initiation bybioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Daniel C WuDepartment of Microbiology and Environmental Toxicology, University of California, Santa Cruz, California, United States of America.ORCID 0000-0003-4650-5672
David Zamorano-SánchezDepartment of Microbiology and Environmental Toxicology, University of California, Santa Cruz, California, United States of America.ORCID 0000-0002-5580-7499
Fernando A PagliaiDepartment of Microbiology and Environmental Toxicology, University of California, Santa Cruz, California, United States of America.ORCID 0000-0002-0434-4594
Jin Hwan ParkDepartment of Microbiology and Environmental Toxicology, University of California, Santa Cruz, California, United States of America.ORCID 0000-0001-8384-7909
Kyle A FloydDepartment of Microbiology and Environmental Toxicology, University of California, Santa Cruz, California, United States of America.ORCID 0000-0003-3261-7999
Calvin K LeeDepartment of Bioengineering, University of California, Los Angeles, California, United States of America.ORCID 0000-0001-6789-0317
Giordan KittsDepartment of Microbiology and Environmental Toxicology, University of California, Santa Cruz, California, United States of America.ORCID 0000-0001-7777-5726
Christopher B RoseDepartment of Microbiology and Environmental Toxicology, University of California, Santa Cruz, California, United States of America.ORCID 0000-0002-0048-5402
Eric M BilottaDepartment of Bioengineering, University of California, Los Angeles, California, United States of America.ORCID 0000-0001-7609-3037
Gerard C L WongDepartment of Bioengineering, University of California, Los Angeles, California, United States of America.
Fitnat H YildizDepartment of Microbiology and Environmental Toxicology, University of California, Santa Cruz, California, United States of America.ORCID 0000-0002-6384-7167
University of California, Santa Cruz · USUniversity of California, Los Angeles · USCalifornia NanoSystems Institute · US

Funding

Vibrio cholerae c-diGMP signaling: Motile to biofilm transition and transmissionR01AI102584 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI YILDIZ, HAVVA FITNAT · 2013 to 2023
$6.5M
BSLII Stationed Zeiss 880 Confocal Microscope with AiryscanS10OD023528 · OD · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI YILDIZ, HAVVA FITNAT · 2017 to 2017
$456k
NIAID NIH HHS R01 AI102584NIH HHS S10 OD023528
6 · The paper itself

Abstract

The assembly status of the V. cholerae flagellum regulates biofilm formation, suggesting that the bacterium senses a lack of movement to commit to a sessile lifestyle. Motility and biofilm formation are inversely regulated by the second messenger molecule cyclic dimeric guanosine monophosphate (c-di-GMP). Therefore, we sought to define the flagellum-associated c-di-GMP-mediated signaling pathways that regulate the transition from a motile to a sessile state. Here we report that elimination of the flagellum, via loss of the FlaA flagellin, results in a flagellum-dependent biofilm regulatory (FDBR) response, which elevates cellular c-di-GMP levels, increases biofilm gene expression, and enhances biofilm formation. The strength of the FDBR response is linked with status of the flagellar stator: it can be reversed by deletion of the T ring component MotX, and reduced by mutations altering either the Na+ binding ability of the stator or the Na+ motive force. Absence of the stator also results in reduction of mannose-sensitive hemagglutinin (MSHA) pilus levels on the cell surface, suggesting interconnectivity of signal transduction pathways involved in biofilm formation. Strains lacking flagellar rotor components similarly launched an FDBR response, however this was independent of the status of assembly of the flagellar stator. We found that the FDBR response requires at least three specific diguanylate cyclases that contribute to increased c-di-GMP levels, and propose that activation of biofilm formation during this response relies on c-di-GMP-dependent activation of positive regulators of biofilm production. Together our results dissect how flagellum assembly activates c-di-GMP signaling circuits, and how V. cholerae utilizes these signals to transition from a motile to a sessile state.

Indexed as

Bacterial ProteinsBiofilmsCyclic GMPEscherichia coli ProteinsFimbriae, BacterialFlagellaGene Expression Regulation, BacterialPhosphorus-Oxygen LyasesSecond Messenger SystemsSignal TransductionVibrio choleraeBacterial Proteinsbis(3',5')-cyclic diguanylic acidCyclic GMPdiguanylate cyclaseEscherichia coli ProteinsPhosphorus-Oxygen Lyases

Identifiers

PMID32176702
PMCPMC7098655
OpenAlexW3011463524

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.