Evidence map›Paper›PMID 32176689›Full record

ArticlePLoS genetics2020

The alarmones (p)ppGpp are part of the heat shock response of Bacillus subtilis.

Heinrich Schäfer, Bertrand Beckert, Christian K Frese, Wieland Steinchen, Aaron M Nuss, Michael Beckstette, Ingo Hantke, Kristina Driller, Petra Sudzinová, Libor Krásný and 5 more

Abstract read
In one paragraph

Article in PLoS genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Article
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  10. Review
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  12. Characterization of heat, salt, acid, alkaline, and antibiotic stress response in soil isolate Bacillus subtilis strain PSK.A2.International microbiology : the official journal of the Spanish Society for Microbiology · 2025
    Article
  13. Review
  14. Article
  15. Article
  16. Microbiology and molecular biology reviews : MMBR · 2024
    Review
  17. mSystems · 2024
    Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Heinrich SchäferInstitute of Microbiology, Leibniz Universität Hannover, Hannover, Germany.ORCID 0000-0002-0873-8347
Bertrand BeckertInstitute for Biochemistry and Molecular Biology, University of Hamburg, Hamburg, Germany.ORCID 0000-0002-9507-3127
Christian K FreseMax Planck Unit for the Science of Pathogens, Berlin, Germany.ORCID 0000-0001-7919-4642
Wieland SteinchenPhilipps-University Marburg, Center for Synthetic Microbiology (SYNMIKRO) and Department of Chemistry, Marburg, Germany.
Aaron M NussDepartment of Molecular Infection Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Michael BeckstetteDepartment of Molecular Infection Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Ingo HantkeInstitute of Microbiology, Leibniz Universität Hannover, Hannover, Germany.
Kristina DrillerMax Planck Unit for the Science of Pathogens, Berlin, Germany.
Petra SudzinováInstitute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic.ORCID 0000-0003-1005-1998
Libor KrásnýInstitute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic.ORCID 0000-0002-4120-4347
Volkhard KaeverHannover Medical School, Research Core Unit Metabolomics, Hannover, Germany.
Petra DerschDepartment of Molecular Infection Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany.ORCID 0000-0001-8177-3280
Gert BangePhilipps-University Marburg, Center for Synthetic Microbiology (SYNMIKRO) and Department of Chemistry, Marburg, Germany.
Daniel N WilsonInstitute for Biochemistry and Molecular Biology, University of Hamburg, Hamburg, Germany.ORCID 0000-0003-3816-3828
Kürşad TurgayInstitute of Microbiology, Leibniz Universität Hannover, Hannover, Germany.ORCID 0000-0002-8959-492X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus subtilis cells are well suited to study how bacteria sense and adapt to proteotoxic stress such as heat, since temperature fluctuations are a major challenge to soil-dwelling bacteria. Here, we show that the alarmones (p)ppGpp, well known second messengers of nutrient starvation, are also involved in the heat stress response as well as the development of thermo-resistance. Upon heat-shock, intracellular levels of (p)ppGpp rise in a rapid but transient manner. The heat-induced (p)ppGpp is primarily produced by the ribosome-associated alarmone synthetase Rel, while the small alarmone synthetases RelP and RelQ seem not to be involved. Furthermore, our study shows that the generated (p)ppGpp pulse primarily acts at the level of translation, and only specific genes are regulated at the transcriptional level. These include the down-regulation of some translation-related genes and the up-regulation of hpf, encoding the ribosome-protecting hibernation-promoting factor. In addition, the alarmones appear to interact with the activity of the stress transcription factor Spx during heat stress. Taken together, our study suggests that (p)ppGpp modulates the translational capacity at elevated temperatures and thereby allows B. subtilis cells to respond to proteotoxic stress, not only by raising the cellular repair capacity, but also by decreasing translation to concurrently reduce the protein load on the cellular protein quality control system.

Indexed as

Bacillus subtilisBacterial ProteinsGene Expression Regulation, BacterialHeat-Shock ResponseLigasesBacterial Proteinsguanosine 3',5'-polyphosphate synthetasesLigases

Identifiers

PMID32176689
PMCPMC7098656

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.