Evidence map›Paper›PMID 32172350›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2020

Integration analysis of metabolites and single nucleotide polymorphisms improves the prediction of drug response of celecoxib.

Xiaoqing Xing, Pengcheng Ma, Qing Huang, Xiemin Qi, Bingjie Zou, Jun Wei, Lei Tao, Lingjun Li, Guohua Zhou, Qinxin Song

Abstract read
PubMed Publisher
In one paragraph

Article in Metabolomics : Official journal of the Metabolomic Society, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Xiaoqing XingKey Laboratory of Drug Quality Control and Pharmacovigilance, Ministry of Education, School of Pharmacy, China Pharmaceutical University, Nanjing, 210009, China.
Pengcheng MaInstitute of Dermatology, Chinese Academy of Medical Sciences, Nanjing, 210042, China.
Qing HuangJiangsu Institute for Food and Drug Control, Nanjing, 210008, China.
Xiemin QiDepartment of Pharmacology, Jinling Hospital, Medical School of Nanjing University, No. 305, Zhongshan East Road, Nanjing, 210002, China.
Bingjie ZouDepartment of Pharmacology, Jinling Hospital, Medical School of Nanjing University, No. 305, Zhongshan East Road, Nanjing, 210002, China.
Jun WeiInstitute of Dermatology, Chinese Academy of Medical Sciences, Nanjing, 210042, China.
Lei TaoInstitute of Dermatology, Chinese Academy of Medical Sciences, Nanjing, 210042, China.
Lingjun LiInstitute of Dermatology, Chinese Academy of Medical Sciences, Nanjing, 210042, China.
Guohua ZhouKey Laboratory of Drug Quality Control and Pharmacovigilance, Ministry of Education, School of Pharmacy, China Pharmaceutical University, Nanjing, 210009, China. ghzhou@nju.edu.cn.
Qinxin SongKey Laboratory of Drug Quality Control and Pharmacovigilance, Ministry of Education, School of Pharmacy, China Pharmaceutical University, Nanjing, 210009, China. songqinxin@cpu.edu.cn.
Chinese Academy of Medical Sciences Dermatology Hospital · CNChina Pharmaceutical University · CNNanjing General Hospital of Nanjing Military Command · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNNanjing University · CNZheJiang Institute For Food and Drug Control · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionPharmacogenetics and pharmacometabolomics are the common methods for personalized medicine, either genetic or metabolic biomarkers have limited predictive power for drug response.

objectivesIn order to better predict drug response, the study attempted to integrate genetic and metabolic biomarkers for drug pharmacokinetics prediction.

methodsThe study chose celecoxib as study object, the pharmacokinetic behavior of celecoxib was assessed in 48 healthy volunteers based on UPLC-MS/MS platform, and celecoxib related single nucleotide polymorphisms (SNPs) were also detected. Three mathematic models were constructed for celecoxib pharmacokinetics prediction, the first one was mainly based on celecoxib-related SNPs; the second was based on the metabolites selected from a pharmacometabolomic analysis by using GC-MS/MS method, the last model was based on the combination of the celecoxib-related SNPs and metabolites above.

resultsThe result proved that the last model showed an improved prediction power, the integration model could explain 71.0% AUC variation and predict 62.3% AUC variation. To facilitate clinical application, ten potential celecoxib-related biomarkers were further screened, which could explain 68.3% and predict 54.6% AUC variation, the predicted AUC was well correlated with the measured values (r = 0.838).

conclusionThis study provides a new route for personalized medicine, the integration of genetic and metabolic biomarkers can predict drug response with a higher accuracy.

Indexed as

AdultAnti-Inflammatory Agents, Non-SteroidalBiomarkersCelecoxibChromatography, High Pressure LiquidHealthy VolunteersHumansMaleMetabolomicsPolymorphism, Single NucleotidePrecision MedicineTandem Mass SpectrometryYoung AdultAnti-Inflammatory Agents, Non-SteroidalBiomarkersCelecoxibCelecoxibMetabolitesPersonalized medicinePharmacometabolomicsPredictionSingle nucleotide polymorphism

Identifiers

PMID32172350
OpenAlexW3011627198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.