Evidence map›Paper›PMID 32172298›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2020

Identification of a novel genomic region associated with resistance to Fusarium crown rot in wheat.

Jingjing Jin, Shuonan Duan, Yongzhi Qi, Suhong Yan, Wei Li, Baoyun Li, Chaojie Xie, Wenchao Zhen, Jun Ma

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
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  9. Review
  10. TaHSP18.6 and TaSRT1 interact to confer resistance toProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Article
  12. Identification of genetic loci and candidate genes underlying Fusarium crown rot resistance in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  13. Review
  14. Article
  15. A novel QTL conferring Fusarium crown rot resistance on chromosome 2A in a wheat EMS mutant.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  16. Dissecting the genetic basis of Fusarium crown rot resistance in wheat by genome wide association study.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
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  19. Genome-wide association analysis of Fusarium crown rot resistance in Chinese wheat landraces.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Jingjing JinCollege of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China.
Shuonan DuanCollege of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China.
Yongzhi QiCollege of Plant Protection, Hebei Agricultural University, Baoding, 071001, China.
Suhong YanInstitute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, China.
Wei LiInstitute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, China.
Baoyun LiCollege of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China.
Chaojie XieCollege of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China.
Wenchao ZhenCollege of Agronomy, Hebei Agricultural University, Baoding, 071001, China. Wenchao@hebau.edu.cn.
Jun MaCollege of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China. Junma@cau.edu.cn.ORCID http://orcid.org/0000-0002-7566-4317
China Agricultural University · CNHebei Agricultural University · CNChinese Academy of Agricultural Sciences · CNHebei Academy of Agriculture and Forestry Sciences · CN

Funding

National Key R&D Program of China 2017YFD0300906National Key R&D Program of China 2018YFD0300501National Natural Science Foundation of China 31872865
6 · The paper itself

Abstract

key messageGenome-wide association study (GWAS) on 358 Chinese wheat germplasms and validation in a biparental population identified a novel significant genomic region on 5DL for FCR resistance. Fusarium crown rot (FCR) is a chronic and severe disease in many dryland wheat-producing areas worldwide. In the last few years, the incidence and severity of FCR progressively increased in China, and the disease has currently become a new threat to local wheat crops. Here, we report a genome-wide association study (GWAS) on a set of 358 Chinese germplasms with the wheat 55 K SNP array. A total of 104 SNPs on chromosomes 1BS, 1DS, 2AL, 5AL, 5DS, 5DL, 6BS and 7BL were significantly associated with seedling resistance to FCR in the association panel. Of these SNPs, a novel 13.78 Mb region targeted by five SNPs on chromosome arm 5DL was continually detected in all three trials. The effects of this region on FCR resistance was confirmed in biparental population. qRT-PCR showed that within this 5DL region, several genes encoding TIR-NBS-LRR proteins and proteins related to mycotoxins deoxynivalenol (DON) detoxification increased rapidly in the disease-resistant variety 04 Zhong 36 than the susceptible variety Xinmai 26 after inoculation. Our study provides new insights into gene discovery and creation of new cultivars with desirable alleles for improving FCR resistance in wheat.

Indexed as

Genome, FungalAllelesChinaChromosome MappingChromosomes, PlantCrosses, GeneticDisease ResistanceFusariumGenetic Association StudiesGenetic MarkersGenotypeHaplotypesPhenotypePlant DiseasesPolymorphism, Single NucleotideTrichothecenesdeoxynivalenolGenetic MarkersTrichothecenes

Identifiers

PMID32172298
OpenAlexW3011076342

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.