Evidence map›Paper›PMID 32171258›Full record

ArticleBMC genomics2020

Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest.

Michael E Sparks, Raman Bansal, Joshua B Benoit, Michael B Blackburn, Hsu Chao, Mengyao Chen, Sammy Cheng, Christopher Childers, Huyen Dinh, Harsha Vardhan Doddapaneni and 47 more

Abstract read
In one paragraph

Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

57 authors.

Michael E SparksUSDA-ARS Invasive Insect Biocontrol and Behavior Laboratory, Beltsville, MD, 20705, USA. michael.sparks2@usda.gov.ORCID http://orcid.org/0000-0001-6251-8559
Raman BansalUSDA-ARS San Joaquin Valley Agricultural Sciences Center, Parlier, CA, 93648, USA.
Joshua B BenoitDepartment of Biological Sciences, University of Cincinnati, Cincinnati, OH, 45221, USA.
Michael B BlackburnUSDA-ARS Invasive Insect Biocontrol and Behavior Laboratory, Beltsville, MD, 20705, USA.
Hsu ChaoDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Mengyao ChenDepartment of Entomology, University of Maryland, College Park, MD, 20742, USA.
Sammy ChengDepartment of Biology, University of Rochester, Rochester, NY, 14627, USA.
Christopher ChildersUSDA-ARS National Agricultural Library, Beltsville, MD, 20705, USA.
Huyen DinhDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Harsha Vardhan DoddapaneniDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Shannon DuganDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Elena N ElpidinaA.N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119911, Russia.
David W FarrowDepartment of Biological Sciences, University of Cincinnati, Cincinnati, OH, 45221, USA.
Markus FriedrichDepartment of Biological Sciences, Wayne State University, Detroit, MI, 48201, USA.
Richard A GibbsDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Brantley HallDepartment of Biochemistry, Virginia Tech, Blacksburg, VA, 24061, USA.
Yi HanDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Richard W HardyDepartment of Biology, Indiana University, Bloomington, IN, 47405, USA.
Christopher J HolmesDepartment of Biological Sciences, University of Cincinnati, Cincinnati, OH, 45221, USA.
Daniel S T HughesDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Panagiotis IoannidisDepartment of Genetic Medicine and Development, University of Geneva Medical School and Swiss Institute of Bioinformatics, 1211, Geneva, Switzerland.
Alys M Cheatle JarvelaDepartment of Entomology, University of Maryland, College Park, MD, 20742, USA.
J Spencer JohnstonDepartment of Entomology, Texas A&M University, College Station, TX, 77843, USA.
Jeffery W JonesDepartment of Biological Sciences, Wayne State University, Detroit, MI, 48201, USA.
Brent A KronmillerCenter for Genome Research and Biocomputing, Oregon State University, Corvallis, OR, 97331, USA.
Faith KungDepartment of Entomology, University of Maryland, College Park, MD, 20742, USA.
Sandra L LeeDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Alexander G MartynovCenter for Data-Intensive Biomedicine and Biotechnology, Skolkovo Institute of Science and Technology, Skolkovo, 143025, Russia.
Patrick MastersonNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, 20894, USA.
Florian MaumusURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Monica Munoz-TorresEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Shwetha C MuraliDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Terence D MurphyNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, 20894, USA.
Donna M MuznyDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
David R NelsonDepartment of Microbiology, Immunology and Biochemistry, University of Tennessee Health Science Center, Memphis, TN, 38163, USA.
Brenda OppertUSDA-ARS Center for Grain and Animal Health Research, Manhattan, KS, 66502, USA.
Kristen A PanfilioDevelopmental Biology, Institute for Zoology: University of Cologne, 50674, Cologne, Germany.
Débora Pires PaulaEMBRAPA Genetic Resources and Biotechnology, Brasília, DF, 70770-901, Brazil.
Leslie PickDepartment of Entomology, University of Maryland, College Park, MD, 20742, USA.
Monica F PoelchauUSDA-ARS National Agricultural Library, Beltsville, MD, 20705, USA.
Jiaxin QuDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Katie RedingDepartment of Entomology, University of Maryland, College Park, MD, 20742, USA.
Joshua H RhoadesUSDA-ARS Invasive Insect Biocontrol and Behavior Laboratory, Beltsville, MD, 20705, USA.
Adelaide RhodesLarner College of Medicine, The University of Vermont, Burlington, VT, 05452, USA.
Stephen RichardsDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Rose RichterDepartment of Biology, University of Rochester, Rochester, NY, 14627, USA.
Hugh M RobertsonDepartment of Entomology, University of Illinois, Urbana-Champaign, IL, 61801, USA.
Andrew J RosendaleDepartment of Biological Sciences, University of Cincinnati, Cincinnati, OH, 45221, USA.
Zhijian Jake TuDepartment of Biochemistry, Virginia Tech, Blacksburg, VA, 24061, USA.
Arun S VelamuriUSDA-ARS Invasive Insect Biocontrol and Behavior Laboratory, Beltsville, MD, 20705, USA.
Robert M WaterhouseDepartment of Ecology and Evolution, University of Lausanne and Swiss Institute of Bioinformatics, 1015, Lausanne, Switzerland.
Matthew T WeirauchDivision of Biomedical Informatics, and Division of Developmental Biology, Center for Autoimmune Genomics and Etiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, 45229, USA.
Jackson T WellsCenter for Genome Research and Biocomputing, Oregon State University, Corvallis, OR, 97331, USA.
John H WerrenDepartment of Biology, University of Rochester, Rochester, NY, 14627, USA.
Kim C WorleyDepartment of Human and Molecular Genetics, Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Evgeny M ZdobnovDepartment of Genetic Medicine and Development, University of Geneva Medical School and Swiss Institute of Bioinformatics, 1211, Geneva, Switzerland.
Dawn E Gundersen-RindalUSDA-ARS Invasive Insect Biocontrol and Behavior Laboratory, Beltsville, MD, 20705, USA. dawn.gundersen-rindal@usda.gov.

Funding

National Biomedical Information ServicesZIHLM200888 · NLM · NATIONAL LIBRARY OF MEDICINE · PI PALTOO, DINA · 2009 to 2025
$5200.7M
The Human Genome Sequencing CenterU54HG003273 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI GIBBS, RICHARD A · 2004 to 2015
$341.3M
Functional evolution of segmentation gene regulatory networks in insectsR01GM113230 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI Leslie Pick · 2015 to 2026
$3.7M
NHGRI NIH HHS U54 HG003273NIGMS NIH HHS R01 GM113230
6 · The paper itself

Abstract

backgroundHalyomorpha halys (Stål), the brown marmorated stink bug, is a highly invasive insect species due in part to its exceptionally high levels of polyphagy. This species is also a nuisance due to overwintering in human-made structures. It has caused significant agricultural losses in recent years along the Atlantic seaboard of North America and in continental Europe. Genomic resources will assist with determining the molecular basis for this species' feeding and habitat traits, defining potential targets for pest management strategies.

resultsAnalysis of the 1.15-Gb draft genome assembly has identified a wide variety of genetic elements underpinning the biological characteristics of this formidable pest species, encompassing the roles of sensory functions, digestion, immunity, detoxification and development, all of which likely support H. halys' capacity for invasiveness. Many of the genes identified herein have potential for biomolecular pesticide applications.

conclusionsAvailability of the H. halys genome sequence will be useful for the development of environmentally friendly biomolecular pesticides to be applied in concert with more traditional, synthetic chemical-based controls.

Indexed as

Insecticide ResistanceAnimalsEcosystemGene Transfer, HorizontalGenome SizeHeteropteraInsect ProteinsIntroduced SpeciesPhylogenyWhole Genome SequencingInsect ProteinsBrown marmorated stink bug genomecathepsinschemoreceptorsinvasive speciesodorant binding proteinsopsinsPentatomid genomicspolyphagyxenobiotic detoxification

Identifiers

PMID32171258
PMCPMC7071726

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.