Evidence map›Paper›PMID 32170832›Full record

ArticleFEBS open bio2020

Biochemical and structural characterization of a thermostable Dps protein with His-type ferroxidase centers and outer metal-binding sites.

Takuo Minato, Takamasa Teramoto, Yoshimitsu Kakuta, Seiji Ogo, Ki-Seok Yoon

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Structural Insights into Iron Ions Accumulation in Dps Nanocage.International journal of molecular sciences · 2022
    Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Takuo MinatoDepartment of Chemistry and Biochemistry, Graduate School of Engineering, Kyushu University, Fukuoka, Japan.ORCID 0000-0002-4372-2906
Takamasa TeramotoDepartment of Bioscience and Biotechnology, Faculty of Agriculture, Kyushu University, Fukuoka, Japan.
Yoshimitsu KakutaDepartment of Bioscience and Biotechnology, Faculty of Agriculture, Kyushu University, Fukuoka, Japan.
Seiji OgoDepartment of Chemistry and Biochemistry, Graduate School of Engineering, Kyushu University, Fukuoka, Japan.
Ki-Seok YoonDepartment of Chemistry and Biochemistry, Graduate School of Engineering, Kyushu University, Fukuoka, Japan.
Kyushu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The DNA-binding protein from starved cells (Dps) is found in a wide range of microorganisms, and it has been well characterized. However, little is known about Dps proteins from nonheterocystous filamentous cyanobacteria. In this study, a Dps protein from the thermophilic nonheterocystous filamentous cyanobacterium Thermoleptolyngbya sp. O-77 (TlDps1) was purified and characterized. PAGE and CD analyses of TlDps1 demonstrated that it had higher thermostability than previously reported Dps proteins. X-ray crystallographic analysis revealed that TlDps1 possessed His-type ferroxidase centers within the cavity and unique metal-binding sites located on the surface of the protein, which presumably contributed to its exceedingly high thermostability.

Indexed as

Bacterial ProteinsBinding SitesCeruloplasminCrystallography, X-RayCyanobacteriaDNA-Binding ProteinsHistidineModels, MolecularProtein ConformationTemperatureTrace ElementsBacterial ProteinsCeruloplasminDNA-Binding ProteinsDPS protein, BacteriaHistidineTrace ElementscyanobacteriaDNA-binding protein from starved cellsHis-type ferroxidase centermetal-binding sitethermostability

Identifiers

PMID32170832
PMCPMC7327923
OpenAlexW3012064417

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.