Evidence map›Paper›PMID 32170712›Full record

ArticleJournal of molecular neuroscience : MN2020

A Combined Proteomics and Bioinformatics Approach Reveals Novel Signaling Pathways and Molecular Targets After Intracerebral Hemorrhage.

Rajaneekar Dasari, Wenbo Zhi, Frederick Bonsack, Sangeetha Sukumari-Ramesh

Abstract read
In one paragraph

Article in Journal of molecular neuroscience : MN, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Rajaneekar DasariDepartment of Pharmacology and Toxicology, Medical College of Georgia, Augusta University, 1120 15th Street, CB3618, Augusta, GA, 30912, USA.
Wenbo ZhiCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Augusta University, Augusta, USA.
Frederick BonsackDepartment of Pharmacology and Toxicology, Medical College of Georgia, Augusta University, 1120 15th Street, CB3618, Augusta, GA, 30912, USA.
Sangeetha Sukumari-RameshDepartment of Pharmacology and Toxicology, Medical College of Georgia, Augusta University, 1120 15th Street, CB3618, Augusta, GA, 30912, USA. sramesh@augusta.edu.

Funding

The Translocator Protein (TSPO) and Intracerebral HemorrhageR01NS107853 · NINDS · AUGUSTA UNIVERSITY · PI SUKUMARI-RAMESH, SANGEETHA · 2018 to 2021
$1.3M
American Heart Association 14SDG18730034NIH HHS R01NS107853NINDS NIH HHS R01 NS107853
6 · The paper itself

Abstract

Intracerebral hemorrhage (ICH) is a non-traumatic cerebrovascular disorder with very high morbidity and mortality and regarded as one of the deadliest stroke subtypes. Notably, there is no effective treatment for ICH. Despite an overall increase in preclinical studies, the pathophysiology of ICH is complex and remains enigmatic. To this end, ICH was induced in male CD-1 mice and the ipsilateral brain tissue was characterized in an unbiased manner using a combination of proteomics and bioinformatics approaches. A total of 4833 proteins were revealed by quantitative proteomic analysis. Of those, 207 proteins exhibited significantly altered expression after ICH in comparison to sham. It was found that 46 proteins were significantly upregulated and 161 proteins were significantly downregulated after ICH compared to sham. The quantitative proteomics approach combined with bioinformatics revealed several novel molecular targets (cyclin-dependent-like kinase 5, E3 ubiquitin-protein ligase, protein phosphatase 2A-alpha, protein phosphatase 2A-beta, serine/threonine-protein kinase PAK1, alpha-actinin-4, calpain-8, axin-1, NCK1, and septin-4), and related signaling pathways, which could play roles in secondary brain injury and long-term neurobehavioral outcomes after ICH warranting further investigation.

Indexed as

Signal TransductionAnimalsBrainCerebral HemorrhageMaleMiceProteomeProteomeBioinformaticsICHMass spectrometryProteomics

Identifiers

PMID32170712
PMCPMC7359136

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.