Evidence map›Paper›PMID 32170550›Full record

ArticlePlant molecular biology2020

Overexpression of ferulate 5-hydroxylase increases syringyl units in Sorghum bicolor.

Hannah M Tetreault, Tammy Gries, Nathan A Palmer, Deanna L Funnell-Harris, Shirley Sato, Zhengxiang Ge, Gautam Sarath, Scott E Sattler

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. GM crops & food · 2024
    Article
  7. Article
  8. Metabolic engineering ofPlant biotechnology (Tokyo, Japan) · 2024
    Article
  9. Article
  10. Article
  11. Lignin, the Lignification Process, and Advanced, Lignin-Based Materials.International journal of molecular sciences · 2023
    Review
  12. Cas9/gRNA-Mediated Mutations inInternational journal of molecular sciences · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Hannah M TetreaultWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, NE, 68583, USA.
Tammy GriesWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, NE, 68583, USA.
Nathan A PalmerWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, NE, 68583, USA.
Deanna L Funnell-HarrisWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, NE, 68583, USA.
Shirley SatoDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.
Zhengxiang GeDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.
Gautam SarathWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, NE, 68583, USA.
Scott E SattlerWheat, Sorghum and Forage Research Unit, USDA-ARS, Lincoln, NE, 68583, USA. scott.sattler@usda.gov.
Agricultural Research Service · USUniversity of Nebraska–Lincoln · US

Funding

Agricultural Research Service 2011-67009-30026Agricultural Research Service 3042-21220-033-00-D
6 · The paper itself

Abstract

Ferulate 5-hydroxylase (F5H) of the monolignol pathway catalyzes the hydroxylation of coniferyl alcohol, coniferaldehyde and ferulic acid to produce 5-hydroxyconiferyl moieties, which lead to the formation of sinapic acid and syringyl (S) lignin monomers. In contrast, guaiacyl (G) lignin, the other major type of lignin monomer, is derived from polymerization of coniferyl alcohol. In this study, the effects of manipulating S-lignin biosynthesis in sorghum (Sorghum bicolor) were evaluated. Overexpression of sorghum F5H (SbF5H), under the control of the CaMV 35S promoter, increased both S-lignin levels and the ratio of S/G lignin, while plant growth and development remained relatively unaffected. Maüle staining of stalk and leaf midrib sections from SbF5H overexpression lines indicated that the lignin composition was altered. Ectopic expression of SbF5H did not affect the gene expression of other monolignol pathway genes. In addition, brown midrib 12-ref (bmr12-ref), a nonsense mutation in the sorghum caffeic acid O-methyltransferase (COMT) was combined with 35S::SbF5H through cross-pollination to examine effects on lignin synthesis. The stover composition from bmr12 35S::SbF5H plants more closely resembled bmr12 stover than 35S::SbF5H or wild-type (WT) stover; S-lignin and total lignin concentrations were decreased relative to WT or 35S::SbF5H. Likewise, expression of upstream monolignol biosynthetic genes was increased in both bmr12 and bmr12 35S::SbF5H relative to WT or 35S::SbF5H. Overall, these results indicated that overexpression of SbF5H did not compensate for the loss of COMT activity. KEY MESSAGE: Overexpression of F5H in sorghum increases S-lignin without increasing total lignin content or affecting plant growth, but it cannot compensate for the loss of COMT activity in monolignol synthesis.

Indexed as

Cytochrome P-450 Enzyme SystemGene Expression Regulation, PlantPlant ProteinsPlants, Genetically ModifiedSorghumCytochrome P-450 Enzyme SystemPlant ProteinsBrown midrib 12 (bmr12)Caffeic acid O-methyltransferaseFerulate 5-hydroxylase (F5H)Sorghum bicolorSyringyl lignin (s-lignin)

Identifiers

PMID32170550
OpenAlexW3012417269

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.