Evidence map›Paper›PMID 32170428›Full record

ArticlePediatric nephrology (Berlin, Germany)2020

A cross-sectional study exploring disease characteristics and phylogenetic nature of human cytomegalovirus among infected neonates with congenital nephrotic syndrome.

Aroni Chatterjee, Sumit Mukherjee, Biswanath Basu, Debsopan Roy, Rivu Basu, Hiya Ghosh, Mala Bhattacharya, Nilanjan Chakraborty

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Article in Pediatric nephrology (Berlin, Germany), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Aroni ChatterjeeVirus Research Laboratory, ICMR-NICED, Kolkata, 700010, India.
Sumit MukherjeeDepartment of Physical Sciences, Indian Institute of Science Education and Research, Kolkata, India.
Biswanath BasuDepartment of Paediatrics, N.R.S. Medical College & Hospital, Kolkata, 700014, India.
Debsopan RoyVirus Research Laboratory, ICMR-NICED, Kolkata, 700010, India.
Rivu BasuDepartment of Community Medicine, R.G.Kar Medical College and Hospital, Kolkata, 700004, India.
Hiya GhoshDepartment of Endocrinology and Metabolism, IPGMER & SSKM Hospital, Kolkata, 700020, India.
Mala BhattacharyaDepartment of Paediatrics, Dr. B.C.Roy Post Graduate Institute of Paediatric Sciences, Kolkata, 700054, India.
Nilanjan ChakrabortyVirus Research Laboratory, ICMR-NICED, Kolkata, 700010, India. nilanjan_19@yahoo.com.
Indian Council of Medical Research · INInstitute of Post Graduate Medical Education and Research · INIndian Institute of Science Education and Research Kolkata · INMedical College and Hospital, Kolkata · INR. G. Kar Medical College and Hospital · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCongenital nephrotic syndrome (CNS) is a rare but serious condition which affects neonates and is caused by monogenic defects of glomerular structural proteins or congenital viral infections. Several reports have established a causal relationship between human cytomegalovirus (HCMV) intrauterine infection and CNS, but thorough study assessing parameters has not yet been done.

methodsThis study aimed to ascertain significant demographic, biochemical, serological, inflammatory and etiological parameters with 12 months follow-up to clinically identify and monitor neonates with HCMV-associated CNS and sought to decipher the phylogenetic nature of infecting strains. Differences between four patient groups (neonates < 4 weeks old) with or without CNS and HCMV infection were compared by unpaired t testing and one-way analysis of variance (ANOVA). Linear regression was performed to assess statistical significance among individual groups. Maximum-likelihood-based phylogenetic analysis was performed with HCMV gH gene sequences to compare clinically isolated and referenced NCBI strains. This was further supported by analysis of effective number of codons (ENc), codon adaptation index (CAI) and mRNA structural variation.

resultsPatients with HCMV-associated CNS were found to have significant variations in many studied parameters compared with controls. The majority of clinical strains formed a separate phylogenetic cluster defining them as somewhat distinct from standard reference strains, which was supported by the other analyses.

conclusionThis study defined parameters for monitoring cases of HCMV-associated CNS, which suggest the possible existence of a selection force acting and rendering these HCMV strains able to infect selective host tissues and cause specific disease types.

Indexed as

AdultCase-Control StudiesCross-Sectional StudiesCytomegalovirusCytomegalovirus InfectionsDNA, ViralFemaleHumansInfant, NewbornMaleNephrotic SyndromeDNA, ViralANOVACongenital nephrotic syndromeDiagnosisHuman cytomegalovirusNatural selectionPhylogeny

Identifiers

PMID32170428
OpenAlexW3011398799

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.