Evidence map›Paper›PMID 32167558›Full record

ArticleHuman molecular genetics2020

A missense variant in specificity protein 6 (SP6) is associated with amelogenesis imperfecta.

Claire E L Smith, Laura L E Whitehouse, James A Poulter, Laura Wilkinson Hewitt, Fatima Nadat, Brian R Jackson, Iain W Manfield, Thomas A Edwards, Helen D Rodd, Chris F Inglehearn and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  3. Antisense oligonucleotides-mediated rescue of theJournal of dental sciences · 2026
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  8. Frontiers in physiology · 2023
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  11. A Novel De NovoGenes · 2021
    Article
  12. Transcriptional Regulation of Dental Epithelial Cell Fate.International journal of molecular sciences · 2020
    Review
  13. Article
  14. Bcl11b/Ctip2 in Skin, Tooth, and Craniofacial System.Frontiers in cell and developmental biology · 2020
    Review
  15. Article
  16. AnFrontiers in physiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Claire E L SmithDivision of Molecular Medicine, Leeds Institute of Medical Research, Faculty of Medicine and Health, St James's University Hospital, University of Leeds, Leeds LS9 7TF, UK.
Laura L E WhitehouseSchool of Dentistry, Faculty of Medicine and Health, University of Leeds, Leeds LS2 9LU, UK.
James A PoulterDivision of Molecular Medicine, Leeds Institute of Medical Research, Faculty of Medicine and Health, St James's University Hospital, University of Leeds, Leeds LS9 7TF, UK.
Laura Wilkinson HewittProtein Production Facility, School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, UK.
Fatima NadatProtein Production Facility, School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, UK.
Brian R JacksonProtein Production Facility, School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, UK.
Iain W ManfieldCentre for Biomolecular Interactions Technology Facility, School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds LS2 9JT, UK.
Thomas A EdwardsSchool of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, UK.
Helen D RoddAcademic Unit of Oral Health Dentistry and Society, School of Clinical Dentistry, University of Sheffield, Sheffield, S10 2TA, UK.
Chris F InglehearnDivision of Molecular Medicine, Leeds Institute of Medical Research, Faculty of Medicine and Health, St James's University Hospital, University of Leeds, Leeds LS9 7TF, UK.
Alan J MighellSchool of Dentistry, Faculty of Medicine and Health, University of Leeds, Leeds LS2 9LU, UK.
University of Leeds · GBSt James's University Hospital · GBUniversity of Sheffield · GB

Funding

Department of HealthWellcome Trust 062164/Z00/ZWellcome Trust 093113
6 · The paper itself

Abstract

Amelogenesis is the process of enamel formation. For amelogenesis to proceed, the cells of the inner enamel epithelium (IEE) must first proliferate and then differentiate into the enamel-producing ameloblasts. Amelogenesis imperfecta (AI) is a heterogeneous group of genetic conditions that result in defective or absent tooth enamel. We identified a 2 bp variant c.817_818GC>AA in SP6, the gene encoding the SP6 transcription factor, in a Caucasian family with autosomal dominant hypoplastic AI. The resulting missense protein change, p.(Ala273Lys), is predicted to alter a DNA-binding residue in the first of three zinc fingers. SP6 has been shown to be crucial to both proliferation of the IEE and to its differentiation into ameloblasts. SP6 has also been implicated as an AI candidate gene through its study in rodent models. We investigated the effect of the missense variant in SP6 (p.(Ala273Lys)) using surface plasmon resonance protein-DNA binding studies. We identified a potential SP6 binding motif in the AMBN proximal promoter sequence and showed that wild-type (WT) SP6 binds more strongly to it than the mutant protein. We hypothesize that SP6 variants may be a very rare cause of AI due to the critical roles of SP6 in development and that the relatively mild effect of the missense variant identified in this study is sufficient to affect amelogenesis causing AI, but not so severe as to be incompatible with life. We suggest that current AI cohorts, both with autosomal recessive and dominant disease, be screened for SP6 variants.

Indexed as

Adaptor Proteins, Signal TransducingAmeloblastsAmelogenesis ImperfectaAutophagy-Related ProteinsCell DifferentiationCell ProliferationDental EnamelDental Enamel ProteinsDNA-Binding ProteinsExome SequencingFemaleGenetic Predisposition to DiseaseHaplotypesHumansKruppel-Like Transcription FactorsMaleAdaptor Proteins, Signal TransducingAutophagy-Related ProteinsDental Enamel ProteinsDNA-Binding ProteinsKLF14 protein, humanKruppel-Like Transcription FactorsPLEKHM1 protein, human

Identifiers

PMID32167558
PMCPMC7268548
OpenAlexW3011972312

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.