Evidence map›Paper›PMID 32167466›Full record

ArticleeLife2020

Effect of helical kink in antimicrobial peptides on membrane pore formation.

Alzbeta Tuerkova, Ivo Kabelka, Tereza Králová, Lukáš Sukeník, Šárka Pokorná, Martin Hof, Robert Vácha

Abstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Membrane Pore Formation by Peptides Studied by Fluorescence Techniques.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Discovery of Novel Genes Encoding Antimicrobial Peptides from theInternational journal of molecular sciences · 2025
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alzbeta Tuerkova *CEITEC - Central European Institute of Technology, Masaryk University, Kamenice, Czech Republic.ORCID 0000-0001-7235-9029
Ivo Kabelka *CEITEC - Central European Institute of Technology, Masaryk University, Kamenice, Czech Republic.
Tereza KrálováCEITEC - Central European Institute of Technology, Masaryk University, Kamenice, Czech Republic.
Lukáš SukeníkCEITEC - Central European Institute of Technology, Masaryk University, Kamenice, Czech Republic.
Šárka PokornáJ. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic.
Martin HofJ. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic.ORCID 0000-0003-2884-3037
Robert VáchaCEITEC - Central European Institute of Technology, Masaryk University, Kamenice, Czech Republic.ORCID 0000-0001-7610-658X

Funding

Czech Science Foundation 19-26854XCzech Science Foundation GA17-11571SMinistry of Education, Youth and Sports of the Czech Republic LM2015042Ministry of Education, Youth and Sports of the Czech Republic LM2015070Ministry of Education, Youth and Sports of the Czech Republic LM2015085Ministry of Education, Youth and Sports of the Czech Republic LQ1601
6 · The paper itself

Abstract

Every cell is protected by a semipermeable membrane. Peptides with the right properties, for example Antimicrobial peptides (AMPs), can disrupt this protective barrier by formation of leaky pores. Unfortunately, matching peptide properties with their ability to selectively form pores in bacterial membranes remains elusive. In particular, the proline/glycine kink in helical peptides was reported to both increase and decrease antimicrobial activity. We used computer simulations and fluorescence experiments to show that a kink in helices affects the formation of membrane pores by stabilizing toroidal pores but disrupting barrel-stave pores. The position of the proline/glycine kink in the sequence further controls the specific structure of toroidal pore. Moreover, we demonstrate that two helical peptides can form a kink-like connection with similar behavior as one long helical peptide with a kink. The provided molecular-level insight can be utilized for design and modification of pore-forming antibacterial peptides or toxins.

Indexed as

Protein ConformationAntimicrobial Cationic PeptidesCell MembraneHydrophobic and Hydrophilic InteractionsModels, BiologicalModels, MolecularMonte Carlo MethodPorinsStructure-Activity RelationshipAntimicrobial Cationic PeptidesPorinsantibioticsfluorescent probesmembrane structuremembrane transportmolecular biophysicsnonestructural biology

Identifiers

PMID32167466
PMCPMC7069690

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.