Evidence map›Paper›PMID 32165822›Full record

ArticleMolecular vision2020

Role of the

Rui Tian, Lufei Wang, He Zou, Meijiao Song, Lu Liu, Hui Zhang

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. MicroRNA Profiling in the Aqueous Humor of Keratoconus Eyes.Translational vision science & technology · 2022
    Article
  5. Review
  6. Article
  7. Biological Function of Long Non-coding RNA (LncRNA) Xist.Frontiers in cell and developmental biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Rui TianDepartment of Ophthalmology, the Second Hospital of Jilin University, Changchun 130000, Jilin Province, China.
Lufei WangDepartment of Ophthalmology, the Second Hospital of Jilin University, Changchun 130000, Jilin Province, China.
He ZouDepartment of Ophthalmology, the Second Hospital of Jilin University, Changchun 130000, Jilin Province, China.
Meijiao SongDepartment of Ophthalmology, the Second Hospital of Jilin University, Changchun 130000, Jilin Province, China.
Lu LiuDepartment of Ophthalmology, the Second Hospital of Jilin University, Changchun 130000, Jilin Province, China.
Hui ZhangDepartment of Ophthalmology, the Second Hospital of Jilin University, Changchun 130000, Jilin Province, China.
Second Affiliated Hospital of Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: As a disorder occurs in the eyes, keratoconus (KC) is induced by the thinning of the corneal stroma. This study was designed to reveal the key long non-coding RNAs (lncRNAs), microRNAs (miRNAs), and mRNAs involved in the mechanisms of KC. Methods: Transcriptome RNA-seq data set GSE112155 was acquired from the Gene Expression Omnibus database, which contained 10 KC samples and 10 myopic control samples. Using the edgeR package, the differentially expressed (DE)-mRNAs between KC and control samples were screened. The DE-lncRNAs and DE-miRNAs in this data set were identified using the HUGO Gene Nomenclature Committee (HGNC). Using the pheatmap package, bidirectional hierarchical clustering of the DE-RNAs was conducted. Then, an enrichment analysis of the DE-mRNAs was performed using the DAVID tool. Moreover, a competitive endogenous RNA (ceRNA) regulatory network was built using the Cytoscape software. After KC-associated pathways were searched within the Comparative Toxicogenomics Database, a KC-associated ceRNA regulatory network was constructed. Results: There were 282 DE-lncRNAs (192 upregulated and 90 downregulated), 40 DE-miRNAs (29 upregulated and 11 downregulated), and 910 DE-mRNAs (554 upregulated and 356 downregulated) between the KC and control samples. A total of 34 functional terms and 9 pathways were enriched for the DE-mRNAs. In addition, 6 mRNAs (including Conclusions:

Indexed as

Collagen Type IVDatabases, GeneticDisease ProgressionDown-RegulationGene Expression RegulationGene OntologyGene Regulatory NetworksHLA-B AntigensHumansKeratoconusMicroRNAsPPAR gammaRNA, Long NoncodingSignal TransductionTranscriptomeUp-RegulationCOL4A1 protein, humanCOL4A2 protein, humanCollagen Type IVHLA-B AntigensMicroRNAsMIrn181 microRNA, humanPPAR gammaPPARG protein, humanRNA, Long NoncodingXIST non-coding RNA

Identifiers

PMID32165822
PMCPMC7043645
OpenAlexW3011261500

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.