Evidence map›Paper›PMID 32165676›Full record

ArticleScientific reports2020

Cloning and characterization of two chlorophyll A/B binding protein genes and analysis of their gene family in Camellia sinensis.

Xian-Wen Li, Yu-Lin Zhu, Chu-Yan Chen, Zhi-Juan Geng, Xiang-Yong Li, Ting-Ting Ye, Xiao-Nan Mao, Fang Du

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 41 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Xian-Wen LiNanfang College of Sun Yat-sen University, Guangzhou, 510970, China. xianwenli01@sina.com.
Yu-Lin ZhuNanfang College of Sun Yat-sen University, Guangzhou, 510970, China.
Chu-Yan ChenNanfang College of Sun Yat-sen University, Guangzhou, 510970, China.
Zhi-Juan GengCollege of Life Science, Xinyang Normal University, Xinyang, 464000, China.
Xiang-Yong LiCollege of Life Science, Xinyang Normal University, Xinyang, 464000, China.
Ting-Ting YeCollege of Life Science, Xinyang Normal University, Xinyang, 464000, China.
Xiao-Nan MaoCollege of Life Science, Xinyang Normal University, Xinyang, 464000, China.
Fang DuCollege of Life Science, Xinyang Normal University, Xinyang, 464000, China.
Xinyang Normal University · CNSun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, two chlorophyll A/B binding protein (CAB) genes (CsCP1 and CsCP2) in tea plant were cloned. The proteins encoded by these genes belong to the external or internal antenna proteins of PS II, respectively. They may be the targets of physiological regulation for tea leaf cell PS II because they all contain multiple functional domains and modifiable sites. The CAB gene family in the tea genome consists of 25 homologous genes. We measured the expression patterns of ten genes in the CsCP1 and CsCP2 subfamily under six different stresses. CsCP1 expression was inhibited in response to 6 kinds of stress; CsCP2 expression was slightly upregulated only after cold stress and ABA treatment. However, the expression levels of CSA016997 and CSA030476 were upregulated significantly in the six stresses. The results suggested that the 10 CAB genes may have different functions in tea leaves. Moreover, changes in the expression of the 10 genes under stress appear to be related to ABA- and MeJA-dependent signalling pathways, and their responses to MeJA treatment is faster than those to ABA. In addition, we introduced our experiences for cloning the genes in the context of complex genomes.

Indexed as

Gene Expression Regulation, PlantGenes, PlantMultigene FamilyCamellia sinensisChlorophyll Binding ProteinsCloning, MolecularGene Expression ProfilingModels, MolecularPhotosynthesisPhylogenyProtein ConformationStructure-Activity RelationshipTranscriptomeChlorophyll Binding Proteins

Identifiers

PMID32165676
PMCPMC7067855
OpenAlexW3011841485

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.