Evidence map›Paper›PMID 32164556›Full record

ArticleBMC medical genetics2020

Molecular and clinical studies in 107 Noonan syndrome affected individuals with PTPN11 mutations.

Jeevana Praharsha Athota, Meenakshi Bhat, Sheela Nampoothiri, Kalpana Gowrishankar, Sanjeeva Ghanti Narayanachar, Vinuth Puttamallesh, Mohammed Oomer Farooque, Swathi Shetty

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 76 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Clinical phenotypes and cochlear implant outcomes in patients with PTPN11-associated noonan spectrum disorders: Insights from a genetically screened cohort.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Noonan Syndrome, Cancer Risk, and Growth Hormone TreatmentJournal of clinical research in pediatric endocrinology · 2025
    Review
  10. Haematologica · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Variants of theGenes · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Jeevana Praharsha AthotaMolecular Genetics, Centre for Human Genetics, Bengaluru, 560100, India.
Meenakshi BhatMolecular Genetics, Centre for Human Genetics, Bengaluru, 560100, India.
Sheela NampoothiriPediatric Genetics, Amrita Institute of Medical Sciences & Research Centre (AIMS), Kochi, 682041, India.
Kalpana GowrishankarMedical Genetics, Kanchi Kamakoti CHILDS Trust Hospital, Chennai, 600034, India.
Sanjeeva Ghanti NarayanacharPediatric Genetics, Indira Gandhi Institute of Child Health, Bengaluru, 560029, India.
Vinuth PuttamalleshMolecular Genetics, Centre for Human Genetics, Bengaluru, 560100, India.
Mohammed Oomer FarooqueMolecular Genetics, Centre for Human Genetics, Bengaluru, 560100, India.
Swathi ShettyMolecular Genetics, Centre for Human Genetics, Bengaluru, 560100, India. swathi@chg.res.in.ORCID 0000-0002-2290-6204
Centre For Human Genetics · INAmrita Institute of Medical Sciences and Research Centre · INIndira Gandhi Institute of Child Health · INKanchi Kamakoti CHILDS Trust Hospital · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNoonan syndrome (NS), an autosomal dominant developmental genetic disorder, is caused by germline mutations in genes associated with the RAS / mitogen-activated protein kinase (MAPK) pathway. In several studies PTPN11 is one of the genes with a significant number of pathogenic variants in NS-affected patients. Therefore, clinically diagnosed NS individuals are initially tested for pathogenic variants in PTPN11 gene to confirm the relationship before studying genotype-phenotype correlation.

methodsIndividuals (363) with clinically diagnosed NS from four hospitals in South India were recruited and the exons of PTPN11 gene were sequenced.

resultsThirty-two previously described pathogenic variants in eight different exons in PTPN11 gene were detected in 107 patients, of whom 10 were familial cases. Exons 3, 8 and 13 had the highest number of pathogenic variants. The most commonly identified pathogenic variants in this series were in exon 8 (c.922A > G, c.923A > G), observed in 22 of the affected. Congenital cardiac anomalies were present in 84% of the mutation-positive cohort, the majority being defects in the right side of the heart. The most common facial features were downward-slanting palpebral fissures, hypertelorism and low-set posteriorly rotated ears. Other clinical features included short stature (40%), pectus excavatum (54%) and, in males, unilateral or bilateral cryptorchidism (44%).

conclusionThe clinical features and mutational spectrum observed in our cohort are similar to those reported in other large studies done worldwide. This is the largest case series of NS-affected individuals with PTPN11 mutations described till date from India.

Indexed as

Polymorphism, Single NucleotideAdolescentAdultChildChild, PreschoolCohort StudiesDNA Mutational AnalysisFamilyFemaleGenetic Association StudiesGenetic Predisposition to DiseaseGerm-Line MutationHeart Defects, CongenitalHumansIndiaInfantProtein Tyrosine Phosphatase, Non-Receptor Type 11PTPN11 protein, humanCongenital heart defectsMutational analysisNoonan syndromePTPN11RASopathySHP-2

Identifiers

PMID32164556
PMCPMC7068896
OpenAlexW3010910506

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.