Evidence map›Paper›PMID 32164312›Full record

ArticleInternational journal of molecular sciences2020

The Polymorphic PolyQ Tail Protein of the Mediator Complex, Med15, Regulates the Variable Response to Diverse Stresses.

Jennifer E G Gallagher, Suk Lan Ser, Michael C Ayers, Casey Nassif, Amaury Pupo

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
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  9. Article
  10. Possible Role for Allelic Variation in YeastFrontiers in microbiology · 2021
    Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jennifer E G GallagherDepartment of Biology, West Virginia University, 53 Campus Drive, Morgantown, WV 26506, USA.ORCID 0000-0002-6163-3181
Suk Lan SerDepartment of Biology, West Virginia University, 53 Campus Drive, Morgantown, WV 26506, USA.
Michael C AyersDepartment of Biology, West Virginia University, 53 Campus Drive, Morgantown, WV 26506, USA.
Casey NassifDepartment of Biology, West Virginia University, 53 Campus Drive, Morgantown, WV 26506, USA.
Amaury PupoDepartment of Biology, West Virginia University, 53 Campus Drive, Morgantown, WV 26506, USA.
West Virginia University · US

Funding

A Systems Approach to Understanding Effects of MCHM on Cellular MetabolismR15ES026811 · NIEHS · WEST VIRGINIA UNIVERSITY · PI GALLAGHER, JENNIFER · 2016 to 2016
$448k
NIH HHS R15ES026811-01A1
6 · The paper itself

Abstract

The Mediator is composed of multiple subunits conserved from yeast to humans and plays a central role in transcription. The tail components are not required for basal transcription but are required for responses to different stresses. While some stresses are familiar, such as heat, desiccation, and starvation, others are exotic, yet yeast can elicit a successful stress response. 4-Methylcyclohexane methanol (MCHM) is a hydrotrope that induces growth arrest in yeast. We found that a naturally occurring variation in the Med15 allele, a component of the Mediator tail, altered the stress response to many chemicals in addition to MCHM. Med15 contains two polyglutamine repeats (polyQ) of variable lengths that change the gene expression of diverse pathways. The Med15 protein existed in multiple isoforms and its stability was dependent on Ydj1, a protein chaperone. The protein level of Med15 with longer polyQ tracts was lower and turned over faster than the allele with shorter polyQ repeats. MCHM sensitivity via variation of Med15 was regulated by Snf1 in a Myc-tag-dependent manner. Tagging Med15 with Myc altered its function in response to stress. Genetic variation in transcriptional regulators magnified genetic differences in response to environmental changes. These polymorphic control genes were master variators.

Indexed as

CyclohexanesGene Expression Regulation, FungalHSP40 Heat-Shock ProteinsMediator ComplexMutationPeptidesProtein Serine-Threonine KinasesProtein StabilitySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsStress, Physiological4-methylcyclohexanemethanolCyclohexanesGAL11 protein, S cerevisiaeHSP40 Heat-Shock ProteinsMediator ComplexPeptidespolyglutamineProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsSNF1-related protein kinasesYDJ1 protein, S cerevisiaehydrotropeinorganic phosphateintrinsically disordered regionsmaster variatorMCHMMed15MediatorMyc tagpolyQprotein chaperoneSnf1stresstranscription factorsyeast

Identifiers

PMID32164312
PMCPMC7094212
OpenAlexW3010846625

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.