Evidence map›Paper›PMID 32163154›Full record

ArticlePlant & cell physiology2020

Mitochondrial Pentatricopeptide Repeat Protein, EMB2794, Plays a Pivotal Role in NADH Dehydrogenase Subunit nad2 mRNA Maturation in Arabidopsis thaliana.

Fernanda Marchetti, Maximiliano Cainzos, Sofía Shevtsov, Juan Pablo Córdoba, Laure Dora Sultan, Axel Brennicke, Mizuki Takenaka, Gabriela Pagnussat, Oren Ostersetzer-Biran, Eduardo Zabaleta

Open access · bronzeAbstract read
In one paragraph

Article in Plant & cell physiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. International journal of molecular sciences · 2022
    Article
  8. Functions of PPR Proteins in Plant Growth and Development.International journal of molecular sciences · 2021
    Review
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Fernanda MarchettiInstituto de Investigaciones Biológicas (IIB)-Universidad Nacional de Mar del Plata (UNMdP)-CONICET, Funes 3250 3er nivel, 7600 Mar del Plata, Argentina.
Maximiliano CainzosInstituto de Investigaciones Biológicas (IIB)-Universidad Nacional de Mar del Plata (UNMdP)-CONICET, Funes 3250 3er nivel, 7600 Mar del Plata, Argentina.
Sofía ShevtsovDepartment of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, 919040 Jerusalem, Israel.
Juan Pablo CórdobaInstituto de Investigaciones Biológicas (IIB)-Universidad Nacional de Mar del Plata (UNMdP)-CONICET, Funes 3250 3er nivel, 7600 Mar del Plata, Argentina.
Laure Dora SultanDepartment of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, 919040 Jerusalem, Israel.
Axel BrennickeInstitut für, Molekulare Botanik, Universität Ulm, Ulm 89069, Germany.
Mizuki TakenakaDepartment of Botany, Graduate School of Science, Kyoto University, Oiwake-cho, Sakyo-ku, Kyoto, 606-8502 Japan.
Gabriela PagnussatInstituto de Investigaciones Biológicas (IIB)-Universidad Nacional de Mar del Plata (UNMdP)-CONICET, Funes 3250 3er nivel, 7600 Mar del Plata, Argentina.
Oren Ostersetzer-BiranDepartment of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, 919040 Jerusalem, Israel.
Eduardo ZabaletaInstituto de Investigaciones Biológicas (IIB)-Universidad Nacional de Mar del Plata (UNMdP)-CONICET, Funes 3250 3er nivel, 7600 Mar del Plata, Argentina.
Consejo Nacional de Investigaciones Científicas y Técnicas · ARHebrew University of Jerusalem · ILKyoto University · JPNational University of Mar del Plata · ARUniversität Ulm · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Arabidopsis genome encodes >450 proteins containing the pentatricopeptide repeat (PPR) motif. The PPR proteins are classified into two groups, termed as P and P Long-Short (PLS) classes. Typically, the PLS subclass proteins are mainly involved in the RNA editing of mitochondrial and chloroplast transcripts, whereas most of the analyzed P subclass proteins have been mainly implicated in RNA metabolism, such as 5' or 3' transcript stabilization and processing, splicing and translation. Mutations of PPR genes often result in embryogenesis and altered seedling developmental defect phenotypes, but only a limited number of ppr mutants have been characterized in detail. In this report, we show that null mutations in the EMB2794 gene result in embryo arrest, due to altered splicing of nad2 transcripts in the Arabidopsis mitochondria. In angiosperms, nad2 has five exons that are transcribed individually from two mitochondrial DNA regions. Biochemical and in vivo analyses further indicate that recombinant or transgenic EMB2794 proteins bind to the nad2 pre-mRNAs in vitro as well as in vivo, suggesting a role for this protein in trans-splicing of nad2 intron 2 and possibly in the stability of the second pre-mRNA of nad2. Homozygous emb2794 lines, showing embryo-defective phenotypes, can be partially rescued by the addition of sucrose to the growth medium. Mitochondria of rescued homozygous mutant plants contain only traces of respiratory complex I, which lack the NADH-dehydrogenase activity.

Indexed as

ArabidopsisArabidopsis ProteinsElectron Transport Complex IGene Expression ProfilingMembrane Potential, MitochondrialMitochondrial ProteinsMutationNADH DehydrogenaseReal-Time Polymerase Chain ReactionRNA, MessengerSeedsTranscriptomeArabidopsis ProteinsElectron Transport Complex IMitochondrial ProteinsNAD2 protein, ArabidopsisNADH Dehydrogenasepentatricopeptide repeat protein, ArabidopsisRNA, MessengerComplex Inad2 transcriptPentatricopeptide repeat proteinPlant mitochondria

Identifiers

PMID32163154
PMCPMC7295397
OpenAlexW3012152454

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.