Evidence map›Paper›PMID 32162442›Full record

ArticleCancer science2020

Metagenomic characterization of lysine acetyltransferases in human cancer and their association with clinicopathologic features.

Yuanyuan Jiang, Xuhui Guo, Lanxin Liu, Shomita Rode, Rui Wang, Hui Liu, Zeng-Quan Yang

Open access · goldAbstract read
In one paragraph

Article in Cancer science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
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  12. Genes · 2022
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  15. Epigenetic crosstalk between hypoxia and tumor driven by HIF regulation.Journal of experimental & clinical cancer research : CR · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 2 countries.

Yuanyuan JiangDepartment of Oncology, Wayne State University School of Medicine, Detroit, MI, USA.
Xuhui GuoDepartment of Oncology, Wayne State University School of Medicine, Detroit, MI, USA.
Lanxin LiuDepartment of Oncology, Wayne State University School of Medicine, Detroit, MI, USA.
Shomita RodeDepartment of Oncology, Wayne State University School of Medicine, Detroit, MI, USA.
Rui WangDepartment of Oncology, Wayne State University School of Medicine, Detroit, MI, USA.
Hui LiuDepartment of Oncology, Wayne State University School of Medicine, Detroit, MI, USA.
Zeng-Quan YangDepartment of Oncology, Wayne State University School of Medicine, Detroit, MI, USA.ORCID https://orcid.org/0000-0002-3658-0081
Wayne State University · US

Funding

DMC FoundationDOD Breast Cancer Research Program BC161536DoD Prostate Cancer Research Program PC130259
6 · The paper itself

Abstract

Lysine acetyltransferases (KATs) are a highly diverse group of epigenetic enzymes that play important roles in various cellular processes including transcription, signal transduction, and cellular metabolism. However, our knowledge of the genomic and transcriptomic alterations of KAT genes and their clinical significance in human cancer remains incomplete. We undertook a metagenomic analysis of 37 KATs in more than 10 000 cancer samples across 33 tumor types, focusing on breast cancer. We identified associations among recurrent genetic alteration, gene expression, clinicopathologic features, and patient survival. Loss-of-function analysis was carried out to examine which KAT has important roles in growth and viability of breast cancer cells. We identified that a subset of KAT genes, including NAA10, KAT6A, and CREBBP, have high frequencies of genomic amplification or mutation in a spectrum of human cancers. Importantly, we found that 3 KATs, NAA10, ACAT2, and BRD4, were highly expressed in the aggressive basal-like subtype, and their expression was significantly associated with disease-free survival. Furthermore, we showed that depletion of NAA10 inhibits basal-like breast cancer growth in vitro. Our findings provide a strong foundation for further mechanistic research and for developing therapies that target NAA10 or other KATs in human cancer.

Indexed as

Breast NeoplasmsCell Line, TumorCell ProliferationCell SurvivalCREB-Binding ProteinDisease-Free SurvivalE1A-Associated p300 ProteinGene DosageGene ExpressionGenome, HumanHistone AcetyltransferasesHumansLysine AcetyltransferasesMutationNeoplasmsN-Terminal Acetyltransferase ACREB-Binding ProteinCREBBP protein, humanE1A-Associated p300 ProteinEP300 protein, humanHistone AcetyltransferasesLysine AcetyltransferasesNAA10 protein, humanN-Terminal Acetyltransferase AN-Terminal Acetyltransferase ETAF1L protein, humanTATA-binding protein associated factor 250 kDaTATA-Binding Protein Associated FactorsTranscription FactorsTranscription Factor TFIIDbreast cancercopy number alterationgene amplificationlysine acetyltransferaseNAA10

Identifiers

PMID32162442
PMCPMC7226209
OpenAlexW3010713341

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.