Evidence map›Paper›PMID 32161093›Full record

ArticleJournal of clinical microbiology2020

Fourier Transform Infrared Spectroscopy Is a New Option for Outbreak Investigation: a Retrospective Analysis of an Extended-Spectrum-Beta-Lactamase-Producing Klebsiella pneumoniae Outbreak in a Neonatal Intensive Care Unit.

Nadya Rakovitsky, Sammy Frenk, Hadas Kon, David Schwartz, Elizabeth Temkin, Ester Solter, Svetlana Paikin, Regev Cohen, Mitchell J Schwaber, Yehuda Carmeli and 1 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05872152 (Impact of Fourier Transform Infrared Spectroscopy), which is not on this map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05872152 narecruitingnot on this mapstarted 2024, after this paper: background citation

Impact of Fourier Transform Infrared Spectroscopy (FTIRS) on the Diffusion of ESBL Producing Enterobacterales in Intensive Care Units (ICU)

TypeinterventionalSponsorUniversity Hospital, CaenRan2024 to 2026Enrolled900ConditionsOrgan Failure, MultipleArmsFTIR results
3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 70 citations in OpenAlex.

  1. Application of FT-IR spectroscopy using the IR BiotyperEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  2. Discrimination betweenOne health (Amsterdam, Netherlands) · 2026
    Article
  3. Machine learning-based typing ofMicrobiology spectrum · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Evaluation of IR BIOTYPERAntimicrobial resistance and infection control · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Rapid Identification of Clinically RelevantJournal of fungi (Basel, Switzerland) · 2025
    Article
  16. Fourier-transform infrared spectroscopy for rapidFrontiers in microbiology · 2025
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Nadya RakovitskyNational Institute for Antibiotic Resistance and Infection Control, Ministry of Health, Tel-Aviv, Israel.
Sammy FrenkNational Institute for Antibiotic Resistance and Infection Control, Ministry of Health, Tel-Aviv, Israel.
Hadas KonNational Institute for Antibiotic Resistance and Infection Control, Ministry of Health, Tel-Aviv, Israel.
David SchwartzNational Institute for Antibiotic Resistance and Infection Control, Ministry of Health, Tel-Aviv, Israel.
Elizabeth TemkinNational Institute for Antibiotic Resistance and Infection Control, Ministry of Health, Tel-Aviv, Israel.
Ester SolterNational Institute for Antibiotic Resistance and Infection Control, Ministry of Health, Tel-Aviv, Israel.
Svetlana PaikinThe Clinical Microbiology Laboratory, Laniado Hospital, Netanya, Israel.
Regev CohenInfectious Diseases Unit, Sanz Medical Center, Laniado Hospital, Netanya, Israel.
Mitchell J SchwaberNational Institute for Antibiotic Resistance and Infection Control, Ministry of Health, Tel-Aviv, Israel.
Yehuda CarmeliNational Institute for Antibiotic Resistance and Infection Control, Ministry of Health, Tel-Aviv, Israel.
Jonathan LelloucheNational Institute for Antibiotic Resistance and Infection Control, Ministry of Health, Tel-Aviv, Israel jonathanl@tlvmc.gov.il.
Israel Ministry of Health · ILLaniado Hospital · ILTel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The IR Biotyper is a new automated typing system based on Fourier-transform infrared (FT-IR) spectroscopy that gives results within 4 h. We aimed (i) to use the IR Biotyper to retrospectively analyze an outbreak of extended-spectrum beta-lactamase-producing

Indexed as

Cross InfectionKlebsiella Infectionsbeta-LactamasesDisease OutbreaksHumansInfant, NewbornIntensive Care Units, NeonatalKlebsiella pneumoniaeRetrospective StudiesSpectroscopy, Fourier Transform Infraredbeta-LactamasesBOX-PCRESBLFT-IR spectroscopyIR BiotyperK. pneumoniaeNICUoutbreakWGS

Identifiers

PMID32161093
PMCPMC7180251
OpenAlexW3011438325

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.