Evidence map›Paper›PMID 32160864›Full record

ArticleBMC microbiology2020

Evaluation of real-time PCR targeting the lipL32 gene for diagnosis of Leptospira infection.

Daša Podgoršek, Eva Ružić-Sabljić, Mateja Logar, Andrea Pavlović, Tatjana Remec, Zvonko Baklan, Emil Pal, Tjaša Cerar

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 3 pooled it
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 3 syntheses or guidelines pooled it, 61 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trends and advances inFrontiers in microbiology · 2024
    Pooled it
  4. Article
  5. Article
  6. Genetic Diversity ofPathogens (Basel, Switzerland) · 2026
    Article
  7. Postflood Leptospirosis Outbreak Response Due toOpen forum infectious diseases · 2026
    Article
  8. Diagnostic Performance of Two Commercial qPCR Kits forTropical medicine and infectious disease · 2026
    Article
  9. Retrospective Molecular Detection and Characterization of PathogenicTropical medicine and infectious disease · 2026
    Article
  10. Review
  11. Laboratory Diagnosis of Leptospirosis.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
  12. Article
  13. Article
  14. Leptospirosis.Nature reviews. Disease primers · 2025
    Review
  15. Article
  16. Diagnostic Pathways ofPathogens (Basel, Switzerland) · 2024
    Article
  17. A retrospective study of animal leptospirosis in Kazakhstan.Journal of advanced veterinary and animal research · 2024
    Article
  18. Article
  19. Article
  20. Case Report: Locally Acquired Leptospirosis in a Minnesota Boy and His Dog.The American journal of tropical medicine and hygiene · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 1 country.

Daša PodgoršekInstitute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Zaloška 4, SI-1000, Ljubljana, Slovenia.
Eva Ružić-SabljićInstitute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Zaloška 4, SI-1000, Ljubljana, Slovenia.
Mateja LogarDepartment of Infectious Diseases, University Medical Centre Ljubljana, Japljeva 2, SI-1000, Ljubljana, Slovenia.
Andrea PavlovićDepartment of Infectious Diseases, General Hospital Celje, Oblakova ulica 5, SI-3000, Celje, Slovenia.
Tatjana RemecDepartment of Infectious Diseases, General Hospital Novo Mesto, Šmihelska cesta 1, SI-5000, Novo Mesto, Slovenia.
Zvonko BaklanDepartment of Infectious Diseases, University Medical Centre Maribor, Ljubljanska ulica 5, SI-2000, Maribor, Slovenia.
Emil PalDepartment of Infectious Diseases, General Hospital Murska Sobota, Ulica dr. Vrbnjaka 6, SI-9000, Murska Sobota, Slovenia.
Tjaša CerarInstitute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Zaloška 4, SI-1000, Ljubljana, Slovenia. tjasa.cerar@mf.uni-lj.si.ORCID 0000-0002-4053-5590
University of Ljubljana · SICollege of Nursing in Celje · SILjubljana University Medical Centre · SIPomurski muzej Murska Sobota · SISchool of Business and Management Novo Mesto · SIUniversity Clinical Centre Maribor · SI

Funding

Ministry of Higher Education, Science and Sport of Slovenia P3-0083
6 · The paper itself

Abstract

backgroundDifferent diagnostic methods have been used for the laboratory confirmation of leptospirosis. Molecular diagnostic techniques are not only faster and more sensitive than culture analysis, but can also detect a Leptospira infection before the appearance of antibodies. The aim of the present study was to analyze and compare two different PCR approaches applied to blood and urine specimens obtained from patients with clinical manifestations that were suggestive of leptospirosis. Furthermore, the results of these different PCR approaches were compared with the results of culture and serology analyses.

resultsA total of 400 samples (234 blood or 58.5% and 166 urine of 41.5%) from 310 Slovenian patients with clinical manifestations suggestive of leptospirosis were tested using conventional PCR assays targeting the rrs gene and RT-PCR targeting the lipL32 gene. Additionally, culture, serology and sequence analysis were performed for the majority of these samples. The PCR and RT-PCR results were concordant in 376 out of 400 of these samples (94.0%). Conventional PCR was positive for 27 out of 400 samples (6.8%) and RT-PCR was positive for 47 out of 400 samples (11.8%). Culture and microscopic agglutination tests supported these diagnoses.

conclusionsA comparison of the two PCR methods indicated that the RT-PCR targeting of the lipL32 gene was faster, more sensitive and more specific for the determination of Leptospira DNA in these clinical samples.

Indexed as

Agglutination TestsBacterial Outer Membrane ProteinsBacteriological TechniquesBloodEarly DiagnosisHumansLeptospiraLeptospirosisLipoproteinsMolecular Diagnostic TechniquesReal-Time Polymerase Chain ReactionSensitivity and SpecificitySequence Analysis, DNAUrineBacterial Outer Membrane ProteinsLipL32 protein, LeptospiraLipoproteinsLeptospiraLeptospirosisLipl32PCR

Identifiers

PMID32160864
PMCPMC7066766
OpenAlexW3011048686

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.