Evidence map›Paper›PMID 32160709›Full record

ArticleMolecular therapy. Nucleic acids2020

An Antisense Oligonucleotide Leads to Suppressed Transcription of Hdac2 and Long-Term Memory Enhancement.

Shane G Poplawski, Krassimira A Garbett, Rebekah L McMahan, Holly B Kordasiewicz, Hien Zhao, Andrew J Kennedy, Slavina B Goleva, Teresa H Sanders, S Timothy Motley, Eric E Swayze and 4 more

Open access · goldAbstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Shane G PoplawskiJ. Craig Venter Institute, La Jolla, CA, USA; Ibis Biosciences and Abbott Company, Carlsbad, CA, USA.
Krassimira A GarbettDepartment of Pharmacology, Vanderbilt University, Nashville, TN, USA.
Rebekah L McMahanDepartment of Pharmacology, Vanderbilt University, Nashville, TN, USA.
Holly B KordasiewiczIonis Pharmaceuticals, Carlsbad, CA, USA.
Hien ZhaoIonis Pharmaceuticals, Carlsbad, CA, USA.
Andrew J KennedyDepartment of Chemistry, Bates College, Lewiston, ME, USA.
Slavina B GolevaDepartment of Molecular Physiology and Biophysics, Vanderbilt University, Nashville, TN, USA.
Teresa H SandersDepartment of Pharmacology, Vanderbilt University, Nashville, TN, USA.
S Timothy MotleyIbis Biosciences and Abbott Company, Carlsbad, CA, USA.
Eric E SwayzeIonis Pharmaceuticals, Carlsbad, CA, USA.
David J EckerIbis Biosciences and Abbott Company, Carlsbad, CA, USA.
J David SweattDepartment of Pharmacology, Vanderbilt University, Nashville, TN, USA.
Todd P MichaelJ. Craig Venter Institute, La Jolla, CA, USA; Ibis Biosciences and Abbott Company, Carlsbad, CA, USA. Electronic address: tmichael@jcvi.org.
Celeste B GreerDepartment of Pharmacology, Vanderbilt University, Nashville, TN, USA. Electronic address: celeste.greer@vanderbilt.edu.
Vanderbilt University · USAbbott (United States) · USIonis Pharmaceuticals (United States) · USBates College · US

Funding

Biochemical Mechanisms of Neural PlasticityR01MH057014 · NIMH · VANDERBILT UNIVERSITY · PI WINDER, DANNY G. · 1996 to 2019
$9.3M
Program in NeurogenomicsT32MH065215 · NIMH · VANDERBILT UNIVERSITY · PI ROGER J COLBRAN · 2002 to 2026
$6.4M
DNA Methylation in Memory FormationR01MH091122 · NIMH · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SWEATT, JOHN DAVID · 2011 to 2015
$1.8M
NIMH NIH HHS R01 MH057014NIMH NIH HHS R01 MH091122NIMH NIH HHS T32 MH065215
6 · The paper itself

Abstract

Knockout of the memory suppressor gene histone deacetylase 2 (Hdac2) in mice elicits cognitive enhancement, and drugs that block HDAC2 have potential as therapeutics for disorders affecting memory. Currently available HDAC2 catalytic activity inhibitors are not fully isoform specific and have short half-lives. Antisense oligonucleotides (ASOs) are drugs that elicit extremely long-lasting, specific inhibition through base pairing with RNA targets. We utilized an ASO to reduce Hdac2 messenger RNA (mRNA) in mice and determined its longevity, specificity, and mechanism of repression. A single injection of the Hdac2-targeted ASO in the central nervous system produced persistent reduction in HDAC2 protein and Hdac2 mRNA levels for 16 weeks. It enhanced object location memory for 8 weeks. RNA sequencing (RNA-seq) analysis of brain tissues revealed that the repression was specific to Hdac2 relative to related Hdac isoforms, and Hdac2 reduction caused alterations in the expression of genes involved in extracellular signal-regulated kinase (ERK) and memory-associated immune signaling pathways. Hdac2-targeted ASOs also suppress a nonpolyadenylated Hdac2 regulatory RNA and elicit direct transcriptional suppression of the Hdac2 gene through stalling RNA polymerase II. These findings identify transcriptional suppression of the target gene as a novel mechanism of action of ASOs.

Indexed as

Alzheimer's diseaseantisense oligonucleotideautismextra-coding RNAHdac2memorytranscription

Identifiers

PMID32160709
PMCPMC7047133
OpenAlexW3003927802

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.